Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 SH3YL1-224ENST00000488044 672 ntTSL 417.44■□□□□ 0.381e-6■■■■□ 24.3
MATR3P43243 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.35■□□□□ 0.372e-6■■■■□ 24.3
MATR3P43243 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.221e-6■■■■□ 24.3
MATR3P43243 KANSL3-207ENST00000444759 2717 ntTSL 216.42■□□□□ 0.222e-6■■■■□ 24.3
MATR3P43243 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.31■□□□□ 0.21e-6■■■■□ 24.3
MATR3P43243 ZNF638-213ENST00000466330 746 ntTSL 316.31■□□□□ 0.21e-9■■■■□ 24.3
MATR3P43243 CRCP-202ENST00000360415 3139 ntTSL 1 (best)16.03■□□□□ 0.161e-6■■■■□ 24.3
MATR3P43243 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.92■□□□□ 0.141e-6■■■■□ 24.3
MATR3P43243 ZNF638-212ENST00000464375 626 ntTSL 315.73■□□□□ 0.111e-9■■■■□ 24.3
MATR3P43243 ZNF638-216ENST00000475743 590 ntTSL 415.66■□□□□ 0.11e-9■■■■□ 24.3
MATR3P43243 ZNF638-214ENST00000466975 560 ntTSL 414.57□□□□□ -0.081e-9■■■■□ 24.3
MATR3P43243 USP53-209ENST00000514665 4233 ntTSL 1 (best)14.54□□□□□ -0.083e-9■■■■□ 24.3
MATR3P43243 SH3YL1-209ENST00000451005 782 ntTSL 513.53□□□□□ -0.241e-6■■■■□ 24.3
MATR3P43243 SH3YL1-220ENST00000475027 599 ntTSL 513.36□□□□□ -0.271e-6■■■■□ 24.3
MATR3P43243 SH3YL1-226ENST00000497051 533 ntTSL 513.29□□□□□ -0.281e-6■■■■□ 24.3
MATR3P43243 SH3YL1-204ENST00000403658 1279 ntTSL 2 BASIC13.21□□□□□ -0.291e-6■■■■□ 24.3
MATR3P43243 SH3YL1-210ENST00000454318 581 ntTSL 313.02□□□□□ -0.331e-6■■■■□ 24.3
MATR3P43243 ZNF638-204ENST00000410075 3518 ntTSL 1 (best) BASIC12.53□□□□□ -0.41e-9■■■■□ 24.3
MATR3P43243 PDCD10-211ENST00000481136 674 ntTSL 212.32□□□□□ -0.448e-7■■■■□ 24.3
MATR3P43243 AC068533.4-201ENST00000450043 922 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.521e-6■■■■□ 24.3
MATR3P43243 KANSL3-201ENST00000354204 5253 ntTSL 1 (best)11.76□□□□□ -0.532e-6■■■■□ 24.3
MATR3P43243 SH3YL1-208ENST00000431160 721 ntTSL 211.5□□□□□ -0.571e-6■■■■□ 24.3
MATR3P43243 KANSL3-206ENST00000431828 5153 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.572e-6■■■■□ 24.3
MATR3P43243 KANSL3-208ENST00000447759 5012 ntTSL 511.29□□□□□ -0.62e-6■■■■□ 24.3
MATR3P43243 KANSL3-204ENST00000420155 5028 ntTSL 1 (best)11.2□□□□□ -0.622e-6■■■■□ 24.3
MATR3P43243 KANSL3-218ENST00000487070 4937 ntTSL 1 (best)11.15□□□□□ -0.622e-6■■■■□ 24.3
MATR3P43243 SH3YL1-225ENST00000488979 541 ntTSL 510.71□□□□□ -0.691e-6■■■■□ 24.3
MATR3P43243 PDCD10-208ENST00000473645 1360 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.728e-7■■■■□ 24.3
MATR3P43243 KANSL3-220ENST00000597150 2811 ntTSL 210.45□□□□□ -0.742e-6■■■■□ 24.3
MATR3P43243 SH3YL1-219ENST00000473104 2463 ntTSL 1 (best)10.36□□□□□ -0.751e-6■■■■□ 24.3
MATR3P43243 SH3YL1-229ENST00000626873 1973 ntTSL 5 BASIC10.32□□□□□ -0.761e-6■■■■□ 24.3
MATR3P43243 SH3YL1-202ENST00000402632 3151 ntTSL 1 (best) BASIC10□□□□□ -0.811e-6■■■■□ 24.3
MATR3P43243 SH3YL1-222ENST00000479739 2236 ntTSL 29.94□□□□□ -0.821e-6■■■■□ 24.3
MATR3P43243 SH3YL1-205ENST00000403712 1695 ntTSL 1 (best) BASIC9.82□□□□□ -0.841e-6■■■■□ 24.3
MATR3P43243 PDCD10-217ENST00000494502 757 ntTSL 59.57□□□□□ -0.888e-7■■■■□ 24.3
MATR3P43243 PDCD10-218ENST00000497056 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.898e-7■■■■□ 24.3
MATR3P43243 SH3YL1-215ENST00000468321 2739 ntTSL 1 (best)8.98□□□□□ -0.971e-6■■■■□ 24.3
MATR3P43243 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC7□□□□□ -1.291e-6■■■■□ 24.3
MATR3P43243 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.98□□□□□ -1.458e-7■■■■□ 24.3
MATR3P43243 PDCD10-210ENST00000479121 430 ntTSL 55.21□□□□□ -1.588e-7■■■■□ 24.3
MATR3P43243 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.09□□□□□ -1.598e-7■■■■□ 24.3
MATR3P43243 PDCD10-209ENST00000475915 849 ntTSL 55.09□□□□□ -1.598e-7■■■■□ 24.3
MATR3P43243 PDCD10-215ENST00000492139 686 ntTSL 54.47□□□□□ -1.698e-7■■■■□ 24.3
MATR3P43243 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.748e-7■■■■□ 24.3
MATR3P43243 PDCD10-205ENST00000464360 585 ntTSL 34.16□□□□□ -1.748e-7■■■■□ 24.3
MATR3P43243 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.1□□□□□ -1.918e-7■■■■□ 24.3
MATR3P43243 GRIPAP1-212ENST00000619149 2828 ntTSL 213.36□□□□□ -0.274e-29■■■■□ 24.3
MATR3P43243 CNOT2-243ENST00000553078 440 ntTSL 311.08□□□□□ -0.642e-6■■■■□ 24.3
MATR3P43243 CNOT2-214ENST00000548741 536 ntTSL 49.14□□□□□ -0.952e-6■■■■□ 24.3
MATR3P43243 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.92e-9■■■■□ 24.3
MATR3P43243 KLHL23-206ENST00000498202 843 ntTSL 319.19■□□□□ 0.662e-9■■■■□ 24.3
MATR3P43243 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.14□□□□□ -1.752e-9■■■■□ 24.3
MATR3P43243 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.21e-6■■■■□ 24.3
MATR3P43243 KRIT1-205ENST00000412043 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.291e-6■■■■□ 24.3
MATR3P43243 KRIT1-202ENST00000394503 2827 ntTSL 2 BASIC10.44□□□□□ -0.741e-6■■■■□ 24.3
MATR3P43243 KRIT1-204ENST00000394507 4762 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.751e-6■■■■□ 24.3
MATR3P43243 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.981e-6■■■■□ 24.3
MATR3P43243 KRIT1-221ENST00000475770 2411 ntTSL 1 (best)8.83□□□□□ -11e-6■■■■□ 24.3
MATR3P43243 KRIT1-222ENST00000486261 4057 ntTSL 1 (best)5.26□□□□□ -1.571e-6■■■■□ 24.3
MATR3P43243 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC11.65□□□□□ -0.544e-7■■■■□ 24.3
MATR3P43243 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.4■■□□□ 1.55e-7■■■■□ 24.3
MATR3P43243 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.31■□□□□ 0.525e-7■■■■□ 24.3
MATR3P43243 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.35e-7■■■■□ 24.3
MATR3P43243 TCP1-211ENST00000539756 780 ntTSL 316.61■□□□□ 0.255e-7■■■■□ 24.3
MATR3P43243 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC14.44□□□□□ -0.15e-7■■■■□ 24.3
MATR3P43243 TCP1-207ENST00000536807 873 ntTSL 213.47□□□□□ -0.255e-7■■■■□ 24.3
MATR3P43243 ANKRD12-205ENST00000546007 978 ntTSL 53.28□□□□□ -1.881e-6■■■■□ 24.3
MATR3P43243 ANKRD12-202ENST00000359158 2250 ntTSL 22.7□□□□□ -1.981e-6■■■■□ 24.3
MATR3P43243 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.79■■■□□ 2.042e-6■■■■□ 24.3
MATR3P43243 RALY-205ENST00000442805 871 ntTSL 527.78■■■□□ 2.042e-6■■■■□ 24.3
MATR3P43243 RALY-206ENST00000448364 1204 ntTSL 226.6■■□□□ 1.852e-6■■■■□ 24.3
MATR3P43243 RALY-204ENST00000413297 766 ntTSL 522.83■■□□□ 1.252e-6■■■■□ 24.3
MATR3P43243 RALY-202ENST00000333552 786 ntTSL 322.76■■□□□ 1.232e-6■■■■□ 24.3
MATR3P43243 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.541e-6■■■■□ 24.2
MATR3P43243 RAP1A-203ENST00000433097 666 ntTSL 518.33■□□□□ 0.521e-6■■■■□ 24.2
MATR3P43243 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.11e-6■■■■□ 24.2
MATR3P43243 RAP1A-202ENST00000369709 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.131e-6■■■■□ 24.2
MATR3P43243 RAP1A-204ENST00000494982 1083 ntTSL 58.87□□□□□ -0.991e-6■■■■□ 24.2
MATR3P43243 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.991e-7■■■■□ 24.2
MATR3P43243 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.1■□□□□ 0.971e-7■■■■□ 24.2
MATR3P43243 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.621e-7■■■■□ 24.2
MATR3P43243 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.692e-6■■■■□ 24.2
MATR3P43243 DLEU1-230ENST00000489542 780 ntTSL 1 (best)5.78□□□□□ -1.488e-7■■■■□ 24.2
MATR3P43243 UBAC1-204ENST00000478485 773 ntTSL 226.29■■□□□ 1.89e-9■■■■□ 24.2
MATR3P43243 UBAC1-205ENST00000486258 243 ntTSL 310.05□□□□□ -0.89e-9■■■■□ 24.2
MATR3P43243 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC13.75□□□□□ -0.219e-7■■■■□ 24.2
MATR3P43243 NAV2-201ENST00000349880 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.479e-7■■■■□ 24.2
MATR3P43243 NAV2-208ENST00000527559 11171 ntTSL 5 BASIC11.87□□□□□ -0.519e-7■■■■□ 24.2
MATR3P43243 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC10.71□□□□□ -0.699e-7■■■■□ 24.2
MATR3P43243 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.879e-7■■■■□ 24.2
MATR3P43243 NAV2-206ENST00000525322 2716 ntTSL 29.49□□□□□ -0.899e-7■■■■□ 24.2
MATR3P43243 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC9.36□□□□□ -0.919e-7■■■■□ 24.2
MATR3P43243 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.069e-7■■■■□ 24.2
MATR3P43243 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.58■□□□□ 0.41e-6■■■■□ 24.2
MATR3P43243 ARL15-205ENST00000507646 578 ntTSL 5 BASIC12.72□□□□□ -0.371e-6■■■■□ 24.2
MATR3P43243 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.641e-6■■■■□ 24.2
MATR3P43243 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.641e-6■■■■□ 24.2
MATR3P43243 ARL15-206ENST00000510591 804 ntTSL 53.71□□□□□ -1.821e-6■■■■□ 24.2
MATR3P43243 EIF5A-210ENST00000575001 609 ntTSL 225.51■■□□□ 1.672e-18■■■■□ 24.2
MATR3P43243 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.131e-8■■■■□ 24.2
Retrieved 100 of 16,209 protein–RNA pairs in 20.9 ms