RNA–Protein interactions for RNA: ENST00000492396.5

PDCD10-216, Transcript of programmed cell death 10, humanhuman

TSL 5 BASIC

Gene PDCD10, Length 814 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-216ENST00000492396 AEBP2Q6ZN18 517 aaPredicted RBP30.48■■■□□ 2.47
PDCD10-216ENST00000492396 CHIC1Q5VXU3 224 aa29.9■■■□□ 2.38
PDCD10-216ENST00000492396 PHF23Q9BUL5 403 aaPredicted RBP26.27■■□□□ 1.8
PDCD10-216ENST00000492396 SENP3Q9H4L4 574 aaPredicted RBP25.92■■□□□ 1.74
PDCD10-216ENST00000492396 PLPPR3Q6T4P5 718 aa24.33■■□□□ 1.49
PDCD10-216ENST00000492396 FOXD1Q16676 465 aa23.99■■□□□ 1.43
PDCD10-216ENST00000492396 PPP6R1Q9UPN7 881 aa23.13■■□□□ 1.29
PDCD10-216ENST00000492396 ADRA2BP18089 450 aa23.1■■□□□ 1.29
PDCD10-216ENST00000492396 PIAS4Q8N2W9 510 aaPredicted RBP22.64■■□□□ 1.21
PDCD10-216ENST00000492396 MSH5O43196 834 aa22.15■■□□□ 1.14
PDCD10-216ENST00000492396 PPP4R3CPQ6ZMV5 832 aa21.41■■□□□ 1.02
PDCD10-216ENST00000492396 SCAF1Q9H7N4 1312 aaKnown RBP21.22■□□□□ 0.99
PDCD10-216ENST00000492396 KCNA4P22459 653 aa20.98■□□□□ 0.95
PDCD10-216ENST00000492396 MAPK8IP2Q13387 824 aaPredicted RBP20.92■□□□□ 0.94
PDCD10-216ENST00000492396 NCBP3Q53F19 620 aaKnown RBP20.91■□□□□ 0.94
PDCD10-216ENST00000492396 CNKSR2Q8WXI2 1034 aa20.83■□□□□ 0.93
PDCD10-216ENST00000492396 DMRT2Q9Y5R5 561 aa20.7■□□□□ 0.9
PDCD10-216ENST00000492396 NPM3O75607 178 aaKnown RBP20.57■□□□□ 0.88
PDCD10-216ENST00000492396 RNF216Q9NWF9 866 aaPredicted RBP20.41■□□□□ 0.86
PDCD10-216ENST00000492396 HOXD11P31277 338 aaPredicted RBP20.31■□□□□ 0.84
PDCD10-216ENST00000492396 DNAJC5BQ9UF47 199 aa20.09■□□□□ 0.81
PDCD10-216ENST00000492396 SLC4A1APQ9BWU0 796 aaKnown RBP20.01■□□□□ 0.79
PDCD10-216ENST00000492396 POTEDQ86YR6 584 aa19.99■□□□□ 0.79
PDCD10-216ENST00000492396 DCAF8L1A6NGE4 600 aa19.71■□□□□ 0.75
PDCD10-216ENST00000492396 EHMT2Q96KQ7 1210 aa19.47■□□□□ 0.71
PDCD10-216ENST00000492396 SLC4A2P04920 1241 aa19.4■□□□□ 0.7
PDCD10-216ENST00000492396 FOXD4L1Q9NU39 408 aa19.33■□□□□ 0.68
PDCD10-216ENST00000492396 ZBTB22O15209 634 aa19.3■□□□□ 0.68
PDCD10-216ENST00000492396 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.3■□□□□ 0.68
PDCD10-216ENST00000492396 CSRNP3Q8WYN3 585 aa19.27■□□□□ 0.68
PDCD10-216ENST00000492396 MYCNP04198 464 aaPredicted RBP19.04■□□□□ 0.64
PDCD10-216ENST00000492396 U3KPZ7 1027 aaPredicted RBP19.01■□□□□ 0.63
PDCD10-216ENST00000492396 RNF39Q9H2S5 420 aa18.98■□□□□ 0.63
PDCD10-216ENST00000492396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.86■□□□□ 0.61
PDCD10-216ENST00000492396 HNRNPUL2Q1KMD3 747 aaKnown RBP18.86■□□□□ 0.61
PDCD10-216ENST00000492396 C1QBPQ07021 282 aaKnown RBP18.78■□□□□ 0.6
PDCD10-216ENST00000492396 SAMD1Q6SPF0 538 aaPredicted RBP18.78■□□□□ 0.6
PDCD10-216ENST00000492396 ATXN8OSP0DMR3 200 aa18.7■□□□□ 0.58
PDCD10-216ENST00000492396 APLP2Q06481 763 aa18.66■□□□□ 0.58
PDCD10-216ENST00000492396 ATF5Q9Y2D1 282 aaPredicted RBP18.45■□□□□ 0.54
PDCD10-216ENST00000492396 SPINK5Q9NQ38 1064 aaPredicted RBP18.43■□□□□ 0.54
PDCD10-216ENST00000492396 CACNB1Q02641 598 aaPredicted RBP18.38■□□□□ 0.53
PDCD10-216ENST00000492396 CAPN15O75808 1086 aa18.36■□□□□ 0.53
PDCD10-216ENST00000492396 ZNF219Q9P2Y4 722 aaPredicted RBP18.35■□□□□ 0.53
PDCD10-216ENST00000492396 TRHP20396 242 aaPredicted RBP18.27■□□□□ 0.52
PDCD10-216ENST00000492396 DSG3P32926 999 aa18.07■□□□□ 0.48
PDCD10-216ENST00000492396 POLA2Q14181 598 aa18.02■□□□□ 0.48
PDCD10-216ENST00000492396 ABCB7O75027 752 aa17.99■□□□□ 0.47
PDCD10-216ENST00000492396 ZBTB12Q9Y330 459 aaPredicted RBP17.81■□□□□ 0.44
PDCD10-216ENST00000492396 FBLN2P98095 1184 aa17.72■□□□□ 0.43
PDCD10-216ENST00000492396 MKRN4PQ13434 485 aaPredicted RBP17.68■□□□□ 0.42
PDCD10-216ENST00000492396 OSCARQ8IYS5 282 aa17.4■□□□□ 0.38
PDCD10-216ENST00000492396 FKBP8Q14318 412 aa17.39■□□□□ 0.37
PDCD10-216ENST00000492396 SPDYE4A6NLX3 237 aa17.33■□□□□ 0.36
PDCD10-216ENST00000492396 SPDYE2BA6NHP3 402 aa17.31■□□□□ 0.36
PDCD10-216ENST00000492396 SPDYE6P0CI01 402 aa17.31■□□□□ 0.36
PDCD10-216ENST00000492396 SPDYE2Q495Y8 402 aa17.31■□□□□ 0.36
PDCD10-216ENST00000492396 RBM42Q9BTD8 480 aaKnown RBP17.25■□□□□ 0.35
PDCD10-216ENST00000492396 ZNF692Q9BU19 519 aaPredicted RBP17.21■□□□□ 0.35
PDCD10-216ENST00000492396 SSUH2Q9Y2M2 353 aa17.18■□□□□ 0.34
PDCD10-216ENST00000492396 PROM2Q8N271 834 aa17.12■□□□□ 0.33
PDCD10-216ENST00000492396 AKT1S1Q96B36 256 aa17.05■□□□□ 0.32
PDCD10-216ENST00000492396 PABPN1Q86U42 306 aaKnown RBP eCLIP16.98■□□□□ 0.31
PDCD10-216ENST00000492396 REM2Q8IYK8 340 aaPredicted RBP16.85■□□□□ 0.29
PDCD10-216ENST00000492396 FBXO3Q9UK99 471 aa16.83■□□□□ 0.28
PDCD10-216ENST00000492396 STAG3Q9UJ98 1225 aa16.78■□□□□ 0.28
PDCD10-216ENST00000492396 SPDYE1Q8NFV5 336 aaPredicted RBP16.77■□□□□ 0.28
PDCD10-216ENST00000492396 PITPNM1O00562 1244 aa16.65■□□□□ 0.26
PDCD10-216ENST00000492396 CLEC11AQ9Y240 323 aa16.62■□□□□ 0.25
PDCD10-216ENST00000492396 VASPP50552 380 aaPredicted RBP16.56■□□□□ 0.24
PDCD10-216ENST00000492396 PRR29P0C7W0 189 aa16.52■□□□□ 0.24
PDCD10-216ENST00000492396 CHRDL2Q6WN34 429 aa16.46■□□□□ 0.23
PDCD10-216ENST00000492396 MIER1Q8N108 512 aa16.41■□□□□ 0.22
PDCD10-216ENST00000492396 PLCD3Q8N3E9 789 aa16.4■□□□□ 0.22
PDCD10-216ENST00000492396 PLEKHG5O94827 1062 aa16.37■□□□□ 0.21
PDCD10-216ENST00000492396 FXR2P51116 673 aaKnown RBP eCLIP16.35■□□□□ 0.21
PDCD10-216ENST00000492396 IFNLR1Q8IU57 520 aaPredicted RBP16.33■□□□□ 0.2
PDCD10-216ENST00000492396 CREBZFQ9NS37 354 aa16.33■□□□□ 0.2
PDCD10-216ENST00000492396 ZBTB47Q9UFB7 747 aaPredicted RBP16.28■□□□□ 0.2
PDCD10-216ENST00000492396 PIP4P2Q8N4L2 257 aa16.27■□□□□ 0.2
PDCD10-216ENST00000492396 PRKAR2AP13861 404 aaKnown RBP16.23■□□□□ 0.19
PDCD10-216ENST00000492396 KLHL34Q8N239 644 aa16.22■□□□□ 0.19
PDCD10-216ENST00000492396 MNX1P50219 401 aaPredicted RBP16.2■□□□□ 0.18
PDCD10-216ENST00000492396 CHADLQ6NUI6 762 aa16.2■□□□□ 0.18
PDCD10-216ENST00000492396 SPOCK2Q92563 424 aa16.13■□□□□ 0.17
PDCD10-216ENST00000492396 FARP1Q9Y4F1 1045 aaPredicted RBP16.11■□□□□ 0.17
PDCD10-216ENST00000492396 NPM1P06748 294 aaKnown RBP eCLIP16.1■□□□□ 0.17
PDCD10-216ENST00000492396 AMER1Q5JTC6 1135 aaPredicted RBP16.04■□□□□ 0.16
PDCD10-216ENST00000492396 NUBP1P53384 320 aa16.01■□□□□ 0.15
PDCD10-216ENST00000492396 RTN4Q9NQC3 1192 aaKnown RBP15.92■□□□□ 0.14
PDCD10-216ENST00000492396 RASEFQ8IZ41 740 aa15.9■□□□□ 0.14
PDCD10-216ENST00000492396 FAM212AQ96EL1 285 aa15.89■□□□□ 0.13
PDCD10-216ENST00000492396 GSE1Q14687 1217 aa15.87■□□□□ 0.13
PDCD10-216ENST00000492396 POTEHQ6S545 545 aa15.86■□□□□ 0.13
PDCD10-216ENST00000492396 CIZ1Q9ULV3 898 aaPredicted RBP15.83■□□□□ 0.12
PDCD10-216ENST00000492396 DCAF8Q5TAQ9 597 aa15.82■□□□□ 0.12
PDCD10-216ENST00000492396 PKD2Q13563 968 aa15.81■□□□□ 0.12
PDCD10-216ENST00000492396 C19orf67A6NJJ6 358 aa15.79■□□□□ 0.12
PDCD10-216ENST00000492396 PAK3O75914 559 aaPredicted RBP15.79■□□□□ 0.12
PDCD10-216ENST00000492396 TRIM41Q8WV44 630 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms