Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.37■■□□□ 1.01
CCND1P24385 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
CCND1P24385 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
CCND1P24385 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCND1P24385 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CCND1P24385 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CCND1P24385 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCND1P24385 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCND1P24385 AC004687.1-201ENST00000579003 1625 ntBASIC21.37■■□□□ 1.01
CCND1P24385 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCND1P24385 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.36■■□□□ 1.01
CCND1P24385 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCND1P24385 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
CCND1P24385 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCND1P24385 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CCND1P24385 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCND1P24385 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
CCND1P24385 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCND1P24385 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.36■■□□□ 1.01
CCND1P24385 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.36■■□□□ 1.01
CCND1P24385 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.36■■□□□ 1.01
CCND1P24385 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.36■■□□□ 1.01
CCND1P24385 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCND1P24385 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
CCND1P24385 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.36■■□□□ 1.01
CCND1P24385 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCND1P24385 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCND1P24385 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCND1P24385 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCND1P24385 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCND1P24385 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCND1P24385 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCND1P24385 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CCND1P24385 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCND1P24385 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCND1P24385 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.35■■□□□ 1.01
CCND1P24385 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CCND1P24385 AC011298.3-201ENST00000615796 283 ntBASIC21.35■■□□□ 1.01
CCND1P24385 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCND1P24385 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
CCND1P24385 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.35■■□□□ 1.01
CCND1P24385 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCND1P24385 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCND1P24385 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.35■■□□□ 1.01
CCND1P24385 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCND1P24385 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
CCND1P24385 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.34■■□□□ 1.01
CCND1P24385 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.34■■□□□ 1.01
CCND1P24385 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.34■■□□□ 1.01
CCND1P24385 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CCND1P24385 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCND1P24385 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCND1P24385 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.34■■□□□ 1.01
CCND1P24385 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCND1P24385 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.34■■□□□ 1.01
CCND1P24385 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCND1P24385 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
CCND1P24385 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCND1P24385 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCND1P24385 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCND1P24385 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CCND1P24385 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCND1P24385 SERBP1P1-201ENST00000396021 1160 ntBASIC21.33■■□□□ 1.01
CCND1P24385 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.33■■□□□ 1.01
CCND1P24385 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.33■■□□□ 1.01
CCND1P24385 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CCND1P24385 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CCND1P24385 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCND1P24385 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCND1P24385 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCND1P24385 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCND1P24385 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CCND1P24385 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCND1P24385 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.32■■□□□ 1
CCND1P24385 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.32■■□□□ 1
CCND1P24385 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CCND1P24385 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.32■■□□□ 1
CCND1P24385 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CCND1P24385 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
CCND1P24385 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCND1P24385 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCND1P24385 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCND1P24385 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.31■■□□□ 1
CCND1P24385 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CCND1P24385 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCND1P24385 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCND1P24385 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CCND1P24385 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CCND1P24385 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCND1P24385 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.31■■□□□ 1
CCND1P24385 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.3■■□□□ 1
CCND1P24385 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.3■■□□□ 1
CCND1P24385 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCND1P24385 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CCND1P24385 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.3■■□□□ 1
CCND1P24385 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCND1P24385 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.3■■□□□ 1
CCND1P24385 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCND1P24385 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCND1P24385 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms