Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCL4P13236 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCL4P13236 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCL4P13236 CYP2T1P-201ENST00000432607 1285 ntBASIC20.25■□□□□ 0.83
CCL4P13236 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CCL4P13236 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.25■□□□□ 0.83
CCL4P13236 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCL4P13236 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.25■□□□□ 0.83
CCL4P13236 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCL4P13236 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCL4P13236 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCL4P13236 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCL4P13236 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCL4P13236 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.25■□□□□ 0.83
CCL4P13236 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCL4P13236 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCL4P13236 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCL4P13236 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCL4P13236 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCL4P13236 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.24■□□□□ 0.83
CCL4P13236 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.24■□□□□ 0.83
CCL4P13236 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.24■□□□□ 0.83
CCL4P13236 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.24■□□□□ 0.83
CCL4P13236 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCL4P13236 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.24■□□□□ 0.83
CCL4P13236 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CCL4P13236 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCL4P13236 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.23■□□□□ 0.83
CCL4P13236 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCL4P13236 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCL4P13236 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CCL4P13236 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCL4P13236 AC073210.2-201ENST00000430369 194 ntBASIC20.23■□□□□ 0.83
CCL4P13236 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.23■□□□□ 0.83
CCL4P13236 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.23■□□□□ 0.83
CCL4P13236 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CCL4P13236 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCL4P13236 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCL4P13236 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCL4P13236 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCL4P13236 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.22■□□□□ 0.83
CCL4P13236 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.22■□□□□ 0.83
CCL4P13236 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.22■□□□□ 0.83
CCL4P13236 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
CCL4P13236 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.22■□□□□ 0.83
CCL4P13236 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.22■□□□□ 0.83
CCL4P13236 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CCL4P13236 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCL4P13236 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.22■□□□□ 0.83
CCL4P13236 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCL4P13236 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCL4P13236 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCL4P13236 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.22■□□□□ 0.83
CCL4P13236 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCL4P13236 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.21■□□□□ 0.83
CCL4P13236 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.21■□□□□ 0.83
CCL4P13236 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCL4P13236 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCL4P13236 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.21■□□□□ 0.83
CCL4P13236 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCL4P13236 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCL4P13236 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCL4P13236 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCL4P13236 MIPEPP3-201ENST00000412105 444 ntBASIC20.21■□□□□ 0.83
CCL4P13236 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.21■□□□□ 0.83
CCL4P13236 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.21■□□□□ 0.83
CCL4P13236 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.21■□□□□ 0.83
CCL4P13236 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.21■□□□□ 0.83
CCL4P13236 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.21■□□□□ 0.83
CCL4P13236 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCL4P13236 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCL4P13236 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
CCL4P13236 MKRN4P-201ENST00000444706 1521 ntBASIC20.21■□□□□ 0.83
CCL4P13236 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CCL4P13236 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.21■□□□□ 0.83
CCL4P13236 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.21■□□□□ 0.83
CCL4P13236 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCL4P13236 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCL4P13236 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCL4P13236 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCL4P13236 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.2■□□□□ 0.82
CCL4P13236 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CCL4P13236 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCL4P13236 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCL4P13236 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CCL4P13236 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.2■□□□□ 0.82
CCL4P13236 AC093787.1-201ENST00000450396 207 ntBASIC20.2■□□□□ 0.82
CCL4P13236 AC007322.4-201ENST00000509611 723 ntBASIC20.2■□□□□ 0.82
CCL4P13236 MIR4758-201ENST00000577688 71 ntBASIC20.2■□□□□ 0.82
CCL4P13236 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.2■□□□□ 0.82
CCL4P13236 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CCL4P13236 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCL4P13236 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.2■□□□□ 0.82
CCL4P13236 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCL4P13236 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCL4P13236 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCL4P13236 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCL4P13236 AC139530.1-201ENST00000575312 1977 ntBASIC20.19■□□□□ 0.82
CCL4P13236 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCL4P13236 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms