Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
HLA-DQB1P01920 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DQB1P01920 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DQB1P01920 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DQB1P01920 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DQB1P01920 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DQB1P01920 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DQB1P01920 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DQB1P01920 AC004687.1-201ENST00000579003 1625 ntBASIC18.45■□□□□ 0.54
HLA-DQB1P01920 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB1P01920 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB1P01920 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB1P01920 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.44■□□□□ 0.54
HLA-DQB1P01920 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.44■□□□□ 0.54
HLA-DQB1P01920 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB1P01920 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB1P01920 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.44■□□□□ 0.54
HLA-DQB1P01920 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.44■□□□□ 0.54
HLA-DQB1P01920 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.44■□□□□ 0.54
HLA-DQB1P01920 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB1P01920 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB1P01920 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB1P01920 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB1P01920 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
HLA-DQB1P01920 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.44■□□□□ 0.54
HLA-DQB1P01920 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.44■□□□□ 0.54
HLA-DQB1P01920 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DQB1P01920 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DQB1P01920 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DQB1P01920 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DQB1P01920 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DQB1P01920 AL049796.1-201ENST00000565336 1766 ntBASIC18.43■□□□□ 0.54
HLA-DQB1P01920 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DQB1P01920 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DQB1P01920 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
HLA-DQB1P01920 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.43■□□□□ 0.54
HLA-DQB1P01920 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.43■□□□□ 0.54
HLA-DQB1P01920 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.43■□□□□ 0.54
HLA-DQB1P01920 AC010980.1-201ENST00000587192 1142 ntBASIC18.43■□□□□ 0.54
HLA-DQB1P01920 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.43■□□□□ 0.54
HLA-DQB1P01920 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DQB1P01920 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DQB1P01920 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DQB1P01920 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.43■□□□□ 0.54
HLA-DQB1P01920 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
HLA-DQB1P01920 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.43■□□□□ 0.54
HLA-DQB1P01920 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.43■□□□□ 0.54
HLA-DQB1P01920 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
HLA-DQB1P01920 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.42■□□□□ 0.54
HLA-DQB1P01920 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.42■□□□□ 0.54
HLA-DQB1P01920 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB1P01920 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HLA-DQB1P01920 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.42■□□□□ 0.54
HLA-DQB1P01920 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB1P01920 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.42■□□□□ 0.54
HLA-DQB1P01920 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB1P01920 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB1P01920 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.42■□□□□ 0.54
HLA-DQB1P01920 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB1P01920 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.42■□□□□ 0.54
HLA-DQB1P01920 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB1P01920 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB1P01920 AC026471.6-201ENST00000622954 1905 ntBASIC18.42■□□□□ 0.54
HLA-DQB1P01920 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB1P01920 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB1P01920 AC073314.1-201ENST00000568729 2216 ntBASIC18.42■□□□□ 0.54
HLA-DQB1P01920 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DQB1P01920 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.41■□□□□ 0.54
HLA-DQB1P01920 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
HLA-DQB1P01920 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB1P01920 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.41■□□□□ 0.54
HLA-DQB1P01920 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
HLA-DQB1P01920 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB1P01920 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HLA-DQB1P01920 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB1P01920 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.41■□□□□ 0.54
HLA-DQB1P01920 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
HLA-DQB1P01920 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
HLA-DQB1P01920 TSPY13P-201ENST00000338964 914 ntBASIC18.41■□□□□ 0.54
HLA-DQB1P01920 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.41■□□□□ 0.54
HLA-DQB1P01920 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.41■□□□□ 0.54
HLA-DQB1P01920 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB1P01920 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.41■□□□□ 0.54
HLA-DQB1P01920 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB1P01920 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DQB1P01920 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.4■□□□□ 0.54
HLA-DQB1P01920 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.4■□□□□ 0.54
HLA-DQB1P01920 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB1P01920 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB1P01920 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB1P01920 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB1P01920 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.4■□□□□ 0.54
HLA-DQB1P01920 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB1P01920 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB1P01920 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB1P01920 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.4■□□□□ 0.54
HLA-DQB1P01920 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB1P01920 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.4■□□□□ 0.54
HLA-DQB1P01920 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HLA-DQB1P01920 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms