Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH16O75309 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDH16O75309 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.52■■□□□ 1.04
CDH16O75309 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH16O75309 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.52■■□□□ 1.04
CDH16O75309 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.52■■□□□ 1.04
CDH16O75309 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CDH16O75309 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH16O75309 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.52■■□□□ 1.04
CDH16O75309 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDH16O75309 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.52■■□□□ 1.03
CDH16O75309 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
CDH16O75309 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDH16O75309 AL049796.1-201ENST00000565336 1766 ntBASIC21.51■■□□□ 1.03
CDH16O75309 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.51■■□□□ 1.03
CDH16O75309 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH16O75309 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CDH16O75309 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDH16O75309 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.51■■□□□ 1.03
CDH16O75309 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.51■■□□□ 1.03
CDH16O75309 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.51■■□□□ 1.03
CDH16O75309 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH16O75309 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.51■■□□□ 1.03
CDH16O75309 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH16O75309 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH16O75309 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH16O75309 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH16O75309 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH16O75309 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH16O75309 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.5■■□□□ 1.03
CDH16O75309 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.5■■□□□ 1.03
CDH16O75309 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH16O75309 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDH16O75309 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH16O75309 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CDH16O75309 MTDHP2-201ENST00000601468 714 ntBASIC21.5■■□□□ 1.03
CDH16O75309 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDH16O75309 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH16O75309 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.5■■□□□ 1.03
CDH16O75309 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CDH16O75309 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CDH16O75309 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH16O75309 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH16O75309 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH16O75309 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CDH16O75309 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CDH16O75309 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CDH16O75309 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CDH16O75309 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.49■■□□□ 1.03
CDH16O75309 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.49■■□□□ 1.03
CDH16O75309 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CDH16O75309 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.49■■□□□ 1.03
CDH16O75309 AL451085.2-201ENST00000605085 799 ntBASIC21.49■■□□□ 1.03
CDH16O75309 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDH16O75309 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH16O75309 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH16O75309 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CDH16O75309 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CDH16O75309 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH16O75309 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH16O75309 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.48■■□□□ 1.03
CDH16O75309 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH16O75309 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.48■■□□□ 1.03
CDH16O75309 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDH16O75309 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH16O75309 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.48■■□□□ 1.03
CDH16O75309 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.48■■□□□ 1.03
CDH16O75309 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH16O75309 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDH16O75309 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH16O75309 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDH16O75309 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CDH16O75309 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH16O75309 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH16O75309 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CDH16O75309 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH16O75309 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.48■■□□□ 1.03
CDH16O75309 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CDH16O75309 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH16O75309 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH16O75309 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH16O75309 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH16O75309 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH16O75309 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH16O75309 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.47■■□□□ 1.03
CDH16O75309 Z92544.1-202ENST00000571933 1220 ntBASIC21.47■■□□□ 1.03
CDH16O75309 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.47■■□□□ 1.03
CDH16O75309 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDH16O75309 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH16O75309 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CDH16O75309 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH16O75309 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH16O75309 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CDH16O75309 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.46■■□□□ 1.03
CDH16O75309 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH16O75309 AC133637.1-201ENST00000624115 1537 ntBASIC21.46■■□□□ 1.03
CDH16O75309 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDH16O75309 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH16O75309 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDH16O75309 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms