Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.43■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.43■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.42■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.42■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.41■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.41■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.41■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.41■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.41■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 AP006587.3-201ENST00000525742 1516 ntBASIC19.41■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.4■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.4■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 CCDC92B-201ENST00000575506 885 ntBASIC19.4■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.4■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.4■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.4■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.4■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 AC005224.4-201ENST00000583262 1652 ntBASIC19.4■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.39■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
TNFSF12-TNFSF13A0A0A6YY99 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.39■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 KRT18P5-201ENST00000436075 1291 ntBASIC19.39■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.39■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 TERF1P2-201ENST00000583350 1212 ntBASIC19.39■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 TPRG1LP1-201ENST00000598702 760 ntBASIC19.39■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.39■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 LINC02228-203ENST00000641970 1355 ntBASIC19.39■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.39■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.38■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 AC026471.6-201ENST00000622954 1905 ntBASIC19.38■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 AC055733.4-201ENST00000638462 1354 ntBASIC19.37■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TNFSF12-TNFSF13A0A0A6YY99 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms