Protein–RNA interactions for Protein: A0A075B6F4

TRBV21OR9-2, T-cell receptor beta variable 21/OR9-2 (pseudogene) (Fragment), humanhuman

Predicted RBP Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV21OR9-2A0A075B6F4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.69■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.69■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.69■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.69■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 SMUG1P1-201ENST00000590640 811 ntBASIC21.68■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.68■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.67■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.67■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.67■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.66■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.66■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 AL049796.1-201ENST00000565336 1766 ntBASIC21.66■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.66■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.65■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.65■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.65■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.65■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.65■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRBV21OR9-2A0A075B6F4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.64■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 AL136116.3-201ENST00000402907 1138 ntBASIC21.64■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 MIR4767-201ENST00000582827 78 ntBASIC21.64■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.64■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.64■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.64■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.63■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.63■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.63■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.63■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV21OR9-2A0A075B6F4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms