Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 XPO7-202ENST00000433566 4519 ntTSL 5 BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 GPR107-201ENST00000347136 7209 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NPIPA3F8WFD2 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 THRAP3-201ENST00000354618 4432 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 IL17REL-202ENST00000389983 3668 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 ELOA2-201ENST00000332567 3050 ntAPPRIS P2 BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 EPHB2-202ENST00000374630 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 DYNC1I1-204ENST00000437599 2895 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 AC068580.4-203ENST00000636397 4038 ntAPPRIS P5 TSL 5 BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 GAS7-201ENST00000323816 8033 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 GAS7-204ENST00000437099 8003 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 RALGAPA2-206ENST00000620717 1432 ntTSL 5 BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 TREM2-201ENST00000338469 860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 MYL9-202ENST00000346786 1024 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 PARK7-202ENST00000377488 783 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 KRT18P50-201ENST00000404337 1243 ntBASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 HNRNPA3P3-201ENST00000416838 1137 ntBASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 AC019118.2-202ENST00000419347 416 ntTSL 3 BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 AC006001.3-205ENST00000428370 579 ntBASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 PRAMEF32P-201ENST00000431596 1068 ntBASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 AC007041.1-201ENST00000438989 1155 ntBASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 CHCHD3P3-201ENST00000446783 640 ntBASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 AC022540.1-201ENST00000448214 965 ntTSL 5 BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 SLC10A7-205ENST00000507030 1134 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 RPSAP71-201ENST00000522496 872 ntBASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 AC009630.1-201ENST00000523081 559 ntTSL 2 BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 AC022182.1-203ENST00000527672 926 ntTSL 2 BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 AP003063.1-202ENST00000529238 520 ntTSL 3 BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 AC022087.1-201ENST00000558372 612 ntTSL 3 BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 AC090409.1-202ENST00000586949 653 ntTSL 2 BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 AC245748.2-201ENST00000588655 574 ntTSL 4 BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 NEAT1_1.1-201ENST00000620348 120 ntBASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 UROD-222ENST00000636836 1173 ntTSL 5 BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 MIEF1-215ENST00000637854 213 ntBASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 TNNT3-217ENST00000641225 877 ntBASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 AC063952.1-201ENST00000637360 2666 ntTSL 3 BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 CADM3-AS1-201ENST00000415675 5044 ntTSL 2 BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 ARHGAP25-203ENST00000409220 2939 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 STAT3-213ENST00000588969 2772 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 CDHR2-206ENST00000510636 4509 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 AC111182.1-201ENST00000588701 3419 ntBASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 PDLIM5-206ENST00000437932 5713 ntTSL 5 BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 POLE3-202ENST00000374171 2191 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 HDC-202ENST00000543581 2180 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 CCDC38-202ENST00000546386 2599 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 SERP1-203ENST00000479209 3934 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 EPHB6-201ENST00000411471 3367 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 MKLN1-AS-202ENST00000429067 2043 ntTSL 2 BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 ZNF488-202ENST00000591025 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 BRD2-205ENST00000449085 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
NPIPA3F8WFD2 TTN-AS1-204ENST00000431259 1472 ntTSL 5 BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 NFXL1-202ENST00000381538 3728 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 DGKA-201ENST00000331886 2909 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 CNN2-207ENST00000565096 2109 ntTSL 2 BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 RPGR-203ENST00000378505 4767 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 RGPD5-201ENST00000016946 7253 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 DHX29-205ENST00000621106 4450 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 KNOP1P4-201ENST00000445020 1438 ntBASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 TCERG1-202ENST00000394421 3633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 ADGRG1-266ENST00000568908 3852 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 AL138889.1-203ENST00000530000 6593 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 CD164-204ENST00000413644 2414 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 ZNF451-205ENST00000370710 375 ntTSL 2 BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 AC019294.1-201ENST00000395215 1184 ntTSL 2 BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 ACTG1P18-201ENST00000401561 1143 ntBASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 TSEN15P3-201ENST00000422363 367 ntBASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 AC007881.2-201ENST00000434990 570 ntTSL 4 BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 BX284656.1-201ENST00000446364 668 ntTSL 3 BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 SERBP1P4-201ENST00000446711 1162 ntBASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 AC096637.1-201ENST00000458662 174 ntTSL 5 BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 RN7SL771P-201ENST00000482328 298 ntBASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 TRIM29-213ENST00000529044 1233 ntTSL 2 BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 C10orf113-202ENST00000534331 579 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 LMO3-211ENST00000534946 1016 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 TRIT1-215ENST00000541099 545 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 CR383656.9-201ENST00000546860 1178 ntBASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 AC008740.1-201ENST00000549658 255 ntBASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 AC136944.3-202ENST00000567422 509 ntBASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 RN7SL491P-201ENST00000584748 269 ntBASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 AC061992.1-202ENST00000587575 490 ntTSL 3 BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 TSPAN16-204ENST00000590327 997 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 MIR6131-201ENST00000611729 109 ntBASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 NOP16-207ENST00000614830 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 AL133396.2-201ENST00000617466 397 ntBASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 AP000533.2-201ENST00000417863 2260 ntBASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 DNAJC9-201ENST00000372950 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 SLC12A4-203ENST00000537830 3525 ntTSL 2 BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 FER1L4-208ENST00000611673 3860 ntTSL 2 BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 AL512380.1-201ENST00000637411 2106 ntBASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 SPIN3-223ENST00000639525 3958 ntTSL 5 BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
NPIPA3F8WFD2 USP6NL-206ENST00000609853 1748 ntTSL 4 BASIC10.61□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms