Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CR383656.9-201ENST00000546860 1178 ntBASIC10.68□□□□□ -0.7
P04436 AC007922.2-201ENST00000579049 281 ntTSL 3 BASIC10.68□□□□□ -0.7
P04436 AC006272.1-201ENST00000596964 552 ntTSL 4 BASIC10.68□□□□□ -0.7
P04436 AC093159.2-201ENST00000603429 636 ntBASIC10.68□□□□□ -0.7
P04436 GGNBP1-203ENST00000612409 592 ntTSL 5 BASIC10.68□□□□□ -0.7
P04436 TARDBP-217ENST00000616545 920 ntTSL 5 BASIC10.68□□□□□ -0.7
P04436 TARDBP-226ENST00000621790 1008 ntTSL 5 BASIC10.68□□□□□ -0.7
P04436 PGM2-206ENST00000625312 661 ntTSL 2 BASIC10.68□□□□□ -0.7
P04436 AL669831.6-201ENST00000635557 837 ntBASIC10.68□□□□□ -0.7
P04436 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC10.68□□□□□ -0.7
P04436 TARDBP-229ENST00000638264 774 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P04436 FP565260.3-202ENST00000623960 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04436 IL10RA-201ENST00000227752 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04436 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04436 AC092802.1-201ENST00000421762 2447 ntTSL 2 BASIC10.68□□□□□ -0.7
P04436 PRPF40B-202ENST00000380281 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04436 NT5E-203ENST00000369651 3918 ntTSL 2 BASIC10.68□□□□□ -0.7
P04436 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
P04436 AP002409.1-201ENST00000584722 2295 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P04436 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04436 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04436 AC010536.1-201ENST00000538868 2611 ntBASIC10.68□□□□□ -0.7
P04436 PMEL-204ENST00000548493 2204 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
P04436 MYO19-213ENST00000614623 4054 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
P04436 RFPL2-201ENST00000248980 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04436 RFPL2-202ENST00000248983 1474 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
P04436 GBA-204ENST00000428024 1817 ntTSL 2 BASIC10.68□□□□□ -0.7
P04436 AL606534.6-201ENST00000611420 1838 ntBASIC10.68□□□□□ -0.7
P04436 PRIMPOL-209ENST00000512834 2174 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 TAS1R2-201ENST00000375371 2542 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
P04436 NUP62-201ENST00000352066 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 PHC1-201ENST00000433083 5033 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 TRAPPC9-202ENST00000438773 4297 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 DPT-201ENST00000367817 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 NR2C2-203ENST00000406272 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 LINC00222-202ENST00000416104 1785 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 CDK17-202ENST00000542666 1769 ntTSL 2 BASIC10.67□□□□□ -0.7
P04436 LMCD1-AS1-201ENST00000420095 2144 ntTSL 2 BASIC10.67□□□□□ -0.7
P04436 SLC38A1-206ENST00000549049 3196 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 SPATA13-202ENST00000382095 6665 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
P04436 USP6NL-201ENST00000277575 4512 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
P04436 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 WARS2-IT1-201ENST00000423984 2060 ntTSL 2 BASIC10.67□□□□□ -0.7
P04436 ALDOC-203ENST00000395321 1722 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
P04436 AL583844.1-201ENST00000424229 1724 ntBASIC10.67□□□□□ -0.7
P04436 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC10.67□□□□□ -0.7
P04436 ANKRD27-204ENST00000587352 3301 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 FCRL6-203ENST00000368106 1306 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 MYL6B-211ENST00000553066 1305 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
P04436 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 PHACTR4-202ENST00000373839 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 NCR1-205ENST00000594765 1612 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
P04436 TTLL13P-206ENST00000641754 2256 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
P04436 TAF1C-218ENST00000567759 3879 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
P04436 CCDC38-202ENST00000546386 2599 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 PGPEP1-202ENST00000269919 7092 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 KNOP1-201ENST00000219837 6432 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 FRG1-201ENST00000226798 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 CELA1-201ENST00000293636 952 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
P04436 SRSF10-205ENST00000374452 1194 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 TROAP-202ENST00000380327 675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 RNA5SP244-201ENST00000390936 112 ntBASIC10.67□□□□□ -0.7
P04436 AC245060.2-201ENST00000412149 524 ntTSL 3 BASIC10.67□□□□□ -0.7
P04436 ARHGEF9-IT1-201ENST00000420917 394 ntTSL 5 BASIC10.67□□□□□ -0.7
P04436 SUCLA2-AS1-201ENST00000423869 552 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 RPL12P45-201ENST00000428087 478 ntBASIC10.67□□□□□ -0.7
P04436 AC106017.1-201ENST00000428348 440 ntTSL 2 BASIC10.67□□□□□ -0.7
P04436 AC007952.3-201ENST00000442355 440 ntTSL 2 BASIC10.67□□□□□ -0.7
P04436 LINC00408-201ENST00000447784 560 ntTSL 5 BASIC10.67□□□□□ -0.7
P04436 AC012462.1-201ENST00000447835 825 ntTSL 5 BASIC10.67□□□□□ -0.7
P04436 RN7SL164P-201ENST00000482613 303 ntBASIC10.67□□□□□ -0.7
P04436 AC007952.8-202ENST00000495691 440 ntTSL 2 BASIC10.67□□□□□ -0.7
P04436 AC016612.1-201ENST00000505367 289 ntBASIC10.67□□□□□ -0.7
P04436 SLC10A7-205ENST00000507030 1134 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 AC138819.1-201ENST00000509363 431 ntTSL 3 BASIC10.67□□□□□ -0.7
P04436 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
P04436 AL355075.5-201ENST00000553568 890 ntBASIC10.67□□□□□ -0.7
P04436 AL133453.1-201ENST00000554055 581 ntTSL 3 BASIC10.67□□□□□ -0.7
P04436 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC10.67□□□□□ -0.7
P04436 AL136115.2-201ENST00000602889 587 ntTSL 5 BASIC10.67□□□□□ -0.7
P04436 NEAT1_1.1-201ENST00000620348 120 ntBASIC10.67□□□□□ -0.7
P04436 BTBD10-201ENST00000278174 2504 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 C22orf23-201ENST00000249079 1560 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
P04436 PLD5-208ENST00000536534 8721 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 USP14-202ENST00000383589 2168 ntTSL 5 BASIC10.67□□□□□ -0.7
P04436 IGSF1-202ENST00000370900 1786 ntTSL 2 BASIC10.67□□□□□ -0.7
P04436 GDF9-207ENST00000624495 1799 ntTSL 2 BASIC10.67□□□□□ -0.7
P04436 DHRS1-202ENST00000396813 1470 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
P04436 SNX13-202ENST00000409604 4146 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 TMEM38B-202ENST00000374692 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 KANSL1-211ENST00000575318 4935 ntTSL 5 BASIC10.67□□□□□ -0.7
P04436 GREB1L-202ENST00000424526 6052 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
P04436 JPT2-201ENST00000248098 3718 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 APEX1-210ENST00000555414 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04436 C1S-221ENST00000617865 2844 ntTSL 5 BASIC10.66□□□□□ -0.7
P04436 ZP1-201ENST00000278853 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms