Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PCDHGB1Q9Y5G3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.55■□□□□ 0.72
PCDHGB1Q9Y5G3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGB1Q9Y5G3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PCDHGB1Q9Y5G3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB1Q9Y5G3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB1Q9Y5G3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHGB1Q9Y5G3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHGB1Q9Y5G3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHGB1Q9Y5G3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.54■□□□□ 0.72
PCDHGB1Q9Y5G3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHGB1Q9Y5G3 PVT1_1.1-201ENST00000615125 194 ntBASIC19.54■□□□□ 0.72
PCDHGB1Q9Y5G3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB1Q9Y5G3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGB1Q9Y5G3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PCDHGB1Q9Y5G3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PCDHGB1Q9Y5G3 AC005703.6-201ENST00000623265 1329 ntBASIC19.53■□□□□ 0.72
PCDHGB1Q9Y5G3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB1Q9Y5G3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PCDHGB1Q9Y5G3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGB1Q9Y5G3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PCDHGB1Q9Y5G3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PCDHGB1Q9Y5G3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB1Q9Y5G3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.53■□□□□ 0.72
PCDHGB1Q9Y5G3 DUX4L4-201ENST00000566884 1269 ntBASIC19.53■□□□□ 0.72
PCDHGB1Q9Y5G3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB1Q9Y5G3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGB1Q9Y5G3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGB1Q9Y5G3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PCDHGB1Q9Y5G3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PCDHGB1Q9Y5G3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGB1Q9Y5G3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHGB1Q9Y5G3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGB1Q9Y5G3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGB1Q9Y5G3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PCDHGB1Q9Y5G3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGB1Q9Y5G3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGB1Q9Y5G3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGB1Q9Y5G3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.52■□□□□ 0.71
PCDHGB1Q9Y5G3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGB1Q9Y5G3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PCDHGB1Q9Y5G3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PCDHGB1Q9Y5G3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB1Q9Y5G3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB1Q9Y5G3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB1Q9Y5G3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGB1Q9Y5G3 MIR4508-201ENST00000584178 70 ntBASIC19.51■□□□□ 0.71
PCDHGB1Q9Y5G3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB1Q9Y5G3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB1Q9Y5G3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB1Q9Y5G3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB1Q9Y5G3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGB1Q9Y5G3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHGB1Q9Y5G3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB1Q9Y5G3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
PCDHGB1Q9Y5G3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PCDHGB1Q9Y5G3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB1Q9Y5G3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PCDHGB1Q9Y5G3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB1Q9Y5G3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB1Q9Y5G3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB1Q9Y5G3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB1Q9Y5G3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGB1Q9Y5G3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB1Q9Y5G3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGB1Q9Y5G3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB1Q9Y5G3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB1Q9Y5G3 MIR6722-201ENST00000617286 78 ntBASIC19.5■□□□□ 0.71
PCDHGB1Q9Y5G3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDHGB1Q9Y5G3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.5■□□□□ 0.71
PCDHGB1Q9Y5G3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PCDHGB1Q9Y5G3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGB1Q9Y5G3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGB1Q9Y5G3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB1Q9Y5G3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGB1Q9Y5G3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHGB1Q9Y5G3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGB1Q9Y5G3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGB1Q9Y5G3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PCDHGB1Q9Y5G3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGB1Q9Y5G3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGB1Q9Y5G3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGB1Q9Y5G3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGB1Q9Y5G3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHGB1Q9Y5G3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGB1Q9Y5G3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGB1Q9Y5G3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGB1Q9Y5G3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGB1Q9Y5G3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGB1Q9Y5G3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PCDHGB1Q9Y5G3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PCDHGB1Q9Y5G3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGB1Q9Y5G3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PCDHGB1Q9Y5G3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB1Q9Y5G3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB1Q9Y5G3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB1Q9Y5G3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB1Q9Y5G3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB1Q9Y5G3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB1Q9Y5G3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms