Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.382e-6■□□□□ 9
DDX52Q9Y2R4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC29.92■■■□□ 2.382e-6■□□□□ 9
DDX52Q9Y2R4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.382e-6■□□□□ 9
DDX52Q9Y2R4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.382e-6■□□□□ 9
DDX52Q9Y2R4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC29.92■■■□□ 2.382e-6■□□□□ 9
DDX52Q9Y2R4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC29.92■■■□□ 2.382e-6■□□□□ 9
DDX52Q9Y2R4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.252e-6■□□□□ 9
DDX52Q9Y2R4 VEGFA-217ENST00000518538 535 ntTSL 226.13■■□□□ 1.772e-6■□□□□ 9
DDX52Q9Y2R4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.54■■□□□ 1.042e-6■□□□□ 9
DDX52Q9Y2R4 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.45■□□□□ 0.222e-6■□□□□ 9
DDX52Q9Y2R4 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC15.87■□□□□ 0.132e-6■□□□□ 9
DDX52Q9Y2R4 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC15.25■□□□□ 0.032e-6■□□□□ 9
DDX52Q9Y2R4 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.022e-6■□□□□ 9
DDX52Q9Y2R4 VEGFA-216ENST00000512683 475 ntTSL 1 (best)14.88□□□□□ -0.032e-6■□□□□ 9
DDX52Q9Y2R4 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC14.74□□□□□ -0.052e-6■□□□□ 9
DDX52Q9Y2R4 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC14.74□□□□□ -0.052e-6■□□□□ 9
DDX52Q9Y2R4 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.052e-6■□□□□ 9
DDX52Q9Y2R4 ITIH2-201ENST00000358415 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.852e-17■□□□□ 9
DDX52Q9Y2R4 CPNE7-205ENST00000529800 519 ntTSL 511.89□□□□□ -0.511e-9■□□□□ 8.9
DDX52Q9Y2R4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.861e-7■□□□□ 8.9
DDX52Q9Y2R4 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.361e-7■□□□□ 8.9
DDX52Q9Y2R4 NKD1-202ENST00000564336 477 ntTSL 326.91■■□□□ 1.92e-6■□□□□ 8.9
DDX52Q9Y2R4 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.822e-6■□□□□ 8.9
DDX52Q9Y2R4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.03■□□□□ 0.82e-9■□□□□ 8.9
DDX52Q9Y2R4 MOB1B-205ENST00000511449 627 ntTSL 320.03■□□□□ 0.82e-9■□□□□ 8.9
DDX52Q9Y2R4 MOB1B-203ENST00000502869 760 ntTSL 318.85■□□□□ 0.612e-9■□□□□ 8.9
DDX52Q9Y2R4 MOB1B-204ENST00000509041 2056 ntTSL 214.09□□□□□ -0.152e-9■□□□□ 8.9
DDX52Q9Y2R4 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.342e-9■□□□□ 8.9
DDX52Q9Y2R4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC27.04■■□□□ 1.923e-6■□□□□ 8.8
DDX52Q9Y2R4 SLC12A4-208ENST00000572010 1016 ntTSL 1 (best)25.13■■□□□ 1.613e-6■□□□□ 8.8
DDX52Q9Y2R4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC24.27■■□□□ 1.483e-6■□□□□ 8.8
DDX52Q9Y2R4 SLC12A4-212ENST00000573023 3649 ntTSL 521.02■□□□□ 0.963e-6■□□□□ 8.8
DDX52Q9Y2R4 TCF25-207ENST00000562256 1879 ntTSL 1 (best)20.84■□□□□ 0.933e-6■□□□□ 8.8
DDX52Q9Y2R4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.42■□□□□ 0.863e-6■□□□□ 8.8
DDX52Q9Y2R4 TCF25-204ENST00000561958 763 ntTSL 319.75■□□□□ 0.753e-6■□□□□ 8.8
DDX52Q9Y2R4 TCF25-222ENST00000568412 797 ntTSL 319.75■□□□□ 0.753e-6■□□□□ 8.8
DDX52Q9Y2R4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.73e-6■□□□□ 8.8
DDX52Q9Y2R4 SLC12A4-207ENST00000571299 891 ntTSL 318.69■□□□□ 0.583e-6■□□□□ 8.8
DDX52Q9Y2R4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.523e-6■□□□□ 8.8
DDX52Q9Y2R4 TCF25-226ENST00000640279 2688 ntTSL 517.8■□□□□ 0.443e-6■□□□□ 8.8
DDX52Q9Y2R4 TMC6-214ENST00000590162 517 ntTSL 217.75■□□□□ 0.432e-10■□□□□ 8.8
DDX52Q9Y2R4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.67■□□□□ 0.423e-6■□□□□ 8.8
DDX52Q9Y2R4 PFKL-208ENST00000491298 819 ntTSL 517.09■□□□□ 0.333e-6■□□□□ 8.8
DDX52Q9Y2R4 SLC12A4-216ENST00000576377 868 ntTSL 516.82■□□□□ 0.283e-6■□□□□ 8.8
DDX52Q9Y2R4 NASP-208ENST00000470768 1036 ntTSL 316.72■□□□□ 0.273e-6■□□□□ 8.8
DDX52Q9Y2R4 NASP-207ENST00000464190 604 ntTSL 216.46■□□□□ 0.233e-6■□□□□ 8.8
DDX52Q9Y2R4 TCF25-221ENST00000568409 857 ntTSL 316.46■□□□□ 0.233e-6■□□□□ 8.8
DDX52Q9Y2R4 TCF25-223ENST00000568870 263 ntTSL 216.46■□□□□ 0.233e-6■□□□□ 8.8
DDX52Q9Y2R4 NASP-211ENST00000525515 565 ntTSL 513.96□□□□□ -0.173e-6■□□□□ 8.8
DDX52Q9Y2R4 NASP-212ENST00000527359 743 ntTSL 313.96□□□□□ -0.173e-6■□□□□ 8.8
DDX52Q9Y2R4 NASP-205ENST00000437901 874 ntTSL 513.93□□□□□ -0.183e-6■□□□□ 8.8
DDX52Q9Y2R4 NASP-213ENST00000527470 532 ntTSL 413.91□□□□□ -0.183e-6■□□□□ 8.8
DDX52Q9Y2R4 NASP-217ENST00000529333 778 ntTSL 413.91□□□□□ -0.183e-6■□□□□ 8.8
DDX52Q9Y2R4 NASP-219ENST00000530840 531 ntTSL 513.91□□□□□ -0.183e-6■□□□□ 8.8
DDX52Q9Y2R4 NASP-220ENST00000531532 554 ntTSL 413.91□□□□□ -0.183e-6■□□□□ 8.8
DDX52Q9Y2R4 NASP-204ENST00000437362 999 ntTSL 213.71□□□□□ -0.213e-6■□□□□ 8.8
DDX52Q9Y2R4 NASP-215ENST00000528084 535 ntTSL 413.51□□□□□ -0.253e-6■□□□□ 8.8
DDX52Q9Y2R4 NASP-225ENST00000629893 253 ntTSL 5 BASIC13.51□□□□□ -0.253e-6■□□□□ 8.8
DDX52Q9Y2R4 SLC12A4-209ENST00000572037 3620 ntTSL 2 BASIC13.27□□□□□ -0.293e-6■□□□□ 8.8
DDX52Q9Y2R4 NUP214-226ENST00000531600 1775 ntTSL 213.07□□□□□ -0.323e-6■□□□□ 8.8
DDX52Q9Y2R4 SLC12A4-219ENST00000576616 3768 ntTSL 2 BASIC12.74□□□□□ -0.373e-6■□□□□ 8.8
DDX52Q9Y2R4 SLC12A4-206ENST00000570802 3761 ntTSL 211.95□□□□□ -0.53e-6■□□□□ 8.8
DDX52Q9Y2R4 NASP-202ENST00000351223 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.513e-6■□□□□ 8.8
DDX52Q9Y2R4 NUP214-220ENST00000529286 493 ntTSL 311.68□□□□□ -0.543e-6■□□□□ 8.8
DDX52Q9Y2R4 NASP-206ENST00000453748 2080 ntTSL 211.64□□□□□ -0.553e-6■□□□□ 8.8
DDX52Q9Y2R4 NUP214-204ENST00000453861 3208 ntTSL 511.11□□□□□ -0.633e-6■□□□□ 8.8
DDX52Q9Y2R4 NUP214-203ENST00000451030 5021 ntTSL 1 (best) BASIC11.1□□□□□ -0.633e-6■□□□□ 8.8
DDX52Q9Y2R4 NASP-216ENST00000528238 894 ntAPPRIS ALT2 TSL 511.03□□□□□ -0.643e-6■□□□□ 8.8
DDX52Q9Y2R4 TCF25-219ENST00000566751 383 ntTSL 59.74□□□□□ -0.853e-6■□□□□ 8.8
DDX52Q9Y2R4 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.853e-6■□□□□ 8.8
DDX52Q9Y2R4 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.883e-6■□□□□ 8.8
DDX52Q9Y2R4 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC9.36□□□□□ -0.913e-6■□□□□ 8.8
DDX52Q9Y2R4 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.963e-6■□□□□ 8.8
DDX52Q9Y2R4 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.043e-6■□□□□ 8.8
DDX52Q9Y2R4 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.23e-6■□□□□ 8.8
DDX52Q9Y2R4 NASP-222ENST00000534101 754 ntTSL 35.07□□□□□ -1.63e-6■□□□□ 8.8
DDX52Q9Y2R4 MATR3-225ENST00000514528 532 ntTSL 420.12■□□□□ 0.812e-13■□□□□ 8.8
DDX52Q9Y2R4 MATR3-213ENST00000508689 561 ntTSL 419.49■□□□□ 0.712e-13■□□□□ 8.8
DDX52Q9Y2R4 MATR3-210ENST00000504643 2560 ntTSL 29.19□□□□□ -0.942e-13■□□□□ 8.8
DDX52Q9Y2R4 DGCR8-204ENST00000457069 770 ntTSL 320.31■□□□□ 0.842e-10■□□□□ 8.8
DDX52Q9Y2R4 ATXN2-217ENST00000548492 556 ntTSL 46.01□□□□□ -1.455e-7■□□□□ 8.8
DDX52Q9Y2R4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.732e-6■□□□□ 8.7
DDX52Q9Y2R4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.632e-6■□□□□ 8.7
DDX52Q9Y2R4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.7■□□□□ 0.422e-6■□□□□ 8.7
DDX52Q9Y2R4 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.122e-6■□□□□ 8.7
DDX52Q9Y2R4 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.232e-6■□□□□ 8.7
DDX52Q9Y2R4 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.42e-6■□□□□ 8.7
DDX52Q9Y2R4 CTNNB1-204ENST00000405570 2513 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.672e-6■□□□□ 8.7
DDX52Q9Y2R4 ATP5A1-205ENST00000586592 2214 ntTSL 226.85■■□□□ 1.892e-6■□□□□ 8.7
DDX52Q9Y2R4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC26.14■■□□□ 1.782e-6■□□□□ 8.7
DDX52Q9Y2R4 ATP5A1-208ENST00000589252 662 ntTSL 523.15■■□□□ 1.32e-6■□□□□ 8.7
DDX52Q9Y2R4 ATP5A1-213ENST00000590406 756 ntTSL 323.15■■□□□ 1.32e-6■□□□□ 8.7
DDX52Q9Y2R4 ATP5A1-210ENST00000589869 910 ntTSL 317.55■□□□□ 0.42e-6■□□□□ 8.7
DDX52Q9Y2R4 ATP5A1-211ENST00000590156 1931 ntTSL 217.02■□□□□ 0.322e-6■□□□□ 8.7
DDX52Q9Y2R4 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC15.96■□□□□ 0.152e-6■□□□□ 8.7
DDX52Q9Y2R4 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.132e-6■□□□□ 8.7
DDX52Q9Y2R4 ATP5A1-218ENST00000592364 576 ntTSL 513.76□□□□□ -0.212e-6■□□□□ 8.7
DDX52Q9Y2R4 ATP5A1-212ENST00000590324 807 ntTSL 511.63□□□□□ -0.552e-6■□□□□ 8.7
DDX52Q9Y2R4 ATP5A1-209ENST00000589611 995 ntTSL 211.39□□□□□ -0.592e-6■□□□□ 8.7
DDX52Q9Y2R4 ATP5A1-202ENST00000398752 5818 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.732e-6■□□□□ 8.7
Retrieved 100 of 4,483 protein–RNA pairs in 134 ms