Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
ZC3H4Q9UPT8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
ZC3H4Q9UPT8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ZC3H4Q9UPT8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ZC3H4Q9UPT8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ZC3H4Q9UPT8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ZC3H4Q9UPT8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ZC3H4Q9UPT8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC26.15■■□□□ 1.78
ZC3H4Q9UPT8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ZC3H4Q9UPT8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC26.15■■□□□ 1.78
ZC3H4Q9UPT8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC26.15■■□□□ 1.78
ZC3H4Q9UPT8 LINC01023-201ENST00000606054 436 ntBASIC26.15■■□□□ 1.78
ZC3H4Q9UPT8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ZC3H4Q9UPT8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
ZC3H4Q9UPT8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
ZC3H4Q9UPT8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.15■■□□□ 1.78
ZC3H4Q9UPT8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ZC3H4Q9UPT8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.15■■□□□ 1.78
ZC3H4Q9UPT8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
ZC3H4Q9UPT8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC26.14■■□□□ 1.78
ZC3H4Q9UPT8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC26.14■■□□□ 1.78
ZC3H4Q9UPT8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC26.14■■□□□ 1.78
ZC3H4Q9UPT8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
ZC3H4Q9UPT8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
ZC3H4Q9UPT8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC26.14■■□□□ 1.78
ZC3H4Q9UPT8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
ZC3H4Q9UPT8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
ZC3H4Q9UPT8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
ZC3H4Q9UPT8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
ZC3H4Q9UPT8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
ZC3H4Q9UPT8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
ZC3H4Q9UPT8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC26.14■■□□□ 1.77
ZC3H4Q9UPT8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.77
ZC3H4Q9UPT8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC26.14■■□□□ 1.77
ZC3H4Q9UPT8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ZC3H4Q9UPT8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.13■■□□□ 1.77
ZC3H4Q9UPT8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.13■■□□□ 1.77
ZC3H4Q9UPT8 AC145676.1-201ENST00000514988 2004 ntBASIC26.13■■□□□ 1.77
ZC3H4Q9UPT8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
ZC3H4Q9UPT8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ZC3H4Q9UPT8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ZC3H4Q9UPT8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ZC3H4Q9UPT8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ZC3H4Q9UPT8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC26.13■■□□□ 1.77
ZC3H4Q9UPT8 AC211429.1-201ENST00000415277 523 ntBASIC26.13■■□□□ 1.77
ZC3H4Q9UPT8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC26.13■■□□□ 1.77
ZC3H4Q9UPT8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC26.13■■□□□ 1.77
ZC3H4Q9UPT8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC26.13■■□□□ 1.77
ZC3H4Q9UPT8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC26.13■■□□□ 1.77
ZC3H4Q9UPT8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC26.13■■□□□ 1.77
ZC3H4Q9UPT8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ZC3H4Q9UPT8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
ZC3H4Q9UPT8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
ZC3H4Q9UPT8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ZC3H4Q9UPT8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
ZC3H4Q9UPT8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.12■■□□□ 1.77
ZC3H4Q9UPT8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ZC3H4Q9UPT8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC26.12■■□□□ 1.77
ZC3H4Q9UPT8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC26.12■■□□□ 1.77
ZC3H4Q9UPT8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC26.12■■□□□ 1.77
ZC3H4Q9UPT8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
ZC3H4Q9UPT8 AP003733.4-201ENST00000623785 1697 ntBASIC26.11■■□□□ 1.77
ZC3H4Q9UPT8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.11■■□□□ 1.77
ZC3H4Q9UPT8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.11■■□□□ 1.77
ZC3H4Q9UPT8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC26.11■■□□□ 1.77
ZC3H4Q9UPT8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ZC3H4Q9UPT8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ZC3H4Q9UPT8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
ZC3H4Q9UPT8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
ZC3H4Q9UPT8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC26.11■■□□□ 1.77
ZC3H4Q9UPT8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC26.11■■□□□ 1.77
ZC3H4Q9UPT8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC26.11■■□□□ 1.77
ZC3H4Q9UPT8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
ZC3H4Q9UPT8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
ZC3H4Q9UPT8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC26.1■■□□□ 1.77
ZC3H4Q9UPT8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ZC3H4Q9UPT8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ZC3H4Q9UPT8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ZC3H4Q9UPT8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ZC3H4Q9UPT8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
ZC3H4Q9UPT8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC26.1■■□□□ 1.77
ZC3H4Q9UPT8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
ZC3H4Q9UPT8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
ZC3H4Q9UPT8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC26.1■■□□□ 1.77
ZC3H4Q9UPT8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
ZC3H4Q9UPT8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC26.1■■□□□ 1.77
ZC3H4Q9UPT8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ZC3H4Q9UPT8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC26.1■■□□□ 1.77
ZC3H4Q9UPT8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC26.1■■□□□ 1.77
ZC3H4Q9UPT8 MAX-217ENST00000557277 728 ntTSL 3 BASIC26.1■■□□□ 1.77
ZC3H4Q9UPT8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC26.1■■□□□ 1.77
ZC3H4Q9UPT8 AC010980.2-201ENST00000587099 1412 ntBASIC26.1■■□□□ 1.77
ZC3H4Q9UPT8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
ZC3H4Q9UPT8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC26.09■■□□□ 1.77
ZC3H4Q9UPT8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC26.09■■□□□ 1.77
ZC3H4Q9UPT8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ZC3H4Q9UPT8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
ZC3H4Q9UPT8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ZC3H4Q9UPT8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ZC3H4Q9UPT8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms