Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 AC073648.6-201ENST00000641589 218 ntBASIC21.32■■□□□ 1
NCDNQ9UBB6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
NCDNQ9UBB6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
NCDNQ9UBB6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.31■■□□□ 1
NCDNQ9UBB6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NCDNQ9UBB6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
NCDNQ9UBB6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
NCDNQ9UBB6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.31■■□□□ 1
NCDNQ9UBB6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.31■■□□□ 1
NCDNQ9UBB6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.31■■□□□ 1
NCDNQ9UBB6 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.31■■□□□ 1
NCDNQ9UBB6 AC007322.4-201ENST00000509611 723 ntBASIC21.31■■□□□ 1
NCDNQ9UBB6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
NCDNQ9UBB6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.31■■□□□ 1
NCDNQ9UBB6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.31■■□□□ 1
NCDNQ9UBB6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.31■■□□□ 1
NCDNQ9UBB6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NCDNQ9UBB6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.3■■□□□ 1
NCDNQ9UBB6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.3■■□□□ 1
NCDNQ9UBB6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.3■■□□□ 1
NCDNQ9UBB6 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.3■■□□□ 1
NCDNQ9UBB6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.3■■□□□ 1
NCDNQ9UBB6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.3■■□□□ 1
NCDNQ9UBB6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
NCDNQ9UBB6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.3■■□□□ 1
NCDNQ9UBB6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.3■■□□□ 1
NCDNQ9UBB6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
NCDNQ9UBB6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.3■■□□□ 1
NCDNQ9UBB6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.29■■□□□ 1
NCDNQ9UBB6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.29■■□□□ 1
NCDNQ9UBB6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NCDNQ9UBB6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.29■■□□□ 1
NCDNQ9UBB6 AC091874.3-201ENST00000512672 1195 ntBASIC21.29■■□□□ 1
NCDNQ9UBB6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.29■■□□□ 1
NCDNQ9UBB6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NCDNQ9UBB6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NCDNQ9UBB6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.28■■□□□ 1
NCDNQ9UBB6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.28■■□□□ 1
NCDNQ9UBB6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
NCDNQ9UBB6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
NCDNQ9UBB6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.28■■□□□ 1
NCDNQ9UBB6 AP003097.1-201ENST00000530657 1135 ntBASIC21.28■■□□□ 1
NCDNQ9UBB6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.28■■□□□ 1
NCDNQ9UBB6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.28■■□□□ 1
NCDNQ9UBB6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.28■■□□□ 1
NCDNQ9UBB6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.28■■□□□ 1
NCDNQ9UBB6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NCDNQ9UBB6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.28■■□□□ 1
NCDNQ9UBB6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
NCDNQ9UBB6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
NCDNQ9UBB6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.28■■□□□ 1
NCDNQ9UBB6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NCDNQ9UBB6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NCDNQ9UBB6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NCDNQ9UBB6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
NCDNQ9UBB6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.27■■□□□ 1
NCDNQ9UBB6 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.27■■□□□ 1
NCDNQ9UBB6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.27■■□□□ 1
NCDNQ9UBB6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.27■■□□□ 1
NCDNQ9UBB6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.27■■□□□ 1
NCDNQ9UBB6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
NCDNQ9UBB6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
NCDNQ9UBB6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
NCDNQ9UBB6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.27■■□□□ 1
NCDNQ9UBB6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NCDNQ9UBB6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NCDNQ9UBB6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCDNQ9UBB6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCDNQ9UBB6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.26■□□□□ 0.99
NCDNQ9UBB6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NCDNQ9UBB6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NCDNQ9UBB6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCDNQ9UBB6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NCDNQ9UBB6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.26■□□□□ 0.99
NCDNQ9UBB6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.26■□□□□ 0.99
NCDNQ9UBB6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NCDNQ9UBB6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.26■□□□□ 0.99
NCDNQ9UBB6 MIR4497-201ENST00000583208 89 ntBASIC21.26■□□□□ 0.99
NCDNQ9UBB6 FAM197Y4-202ENST00000622692 608 ntBASIC21.26■□□□□ 0.99
NCDNQ9UBB6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCDNQ9UBB6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCDNQ9UBB6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NCDNQ9UBB6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NCDNQ9UBB6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
NCDNQ9UBB6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCDNQ9UBB6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NCDNQ9UBB6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCDNQ9UBB6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCDNQ9UBB6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.25■□□□□ 0.99
NCDNQ9UBB6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCDNQ9UBB6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.25■□□□□ 0.99
NCDNQ9UBB6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCDNQ9UBB6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCDNQ9UBB6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCDNQ9UBB6 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.25■□□□□ 0.99
NCDNQ9UBB6 AC211429.1-201ENST00000415277 523 ntBASIC21.25■□□□□ 0.99
NCDNQ9UBB6 UNC93B5-201ENST00000530315 699 ntBASIC21.25■□□□□ 0.99
NCDNQ9UBB6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.25■□□□□ 0.99
NCDNQ9UBB6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.25■□□□□ 0.99
NCDNQ9UBB6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms