Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL20A1Q9P218 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC24.37■■□□□ 1.49
COL20A1Q9P218 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC24.37■■□□□ 1.49
COL20A1Q9P218 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC24.36■■□□□ 1.49
COL20A1Q9P218 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
COL20A1Q9P218 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
COL20A1Q9P218 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
COL20A1Q9P218 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.36■■□□□ 1.49
COL20A1Q9P218 AC010141.2-201ENST00000452426 721 ntBASIC24.36■■□□□ 1.49
COL20A1Q9P218 EEF1DP3-203ENST00000566025 782 ntBASIC24.36■■□□□ 1.49
COL20A1Q9P218 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.36■■□□□ 1.49
COL20A1Q9P218 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.36■■□□□ 1.49
COL20A1Q9P218 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.36■■□□□ 1.49
COL20A1Q9P218 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.36■■□□□ 1.49
COL20A1Q9P218 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL20A1Q9P218 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COL20A1Q9P218 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.35■■□□□ 1.49
COL20A1Q9P218 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL20A1Q9P218 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COL20A1Q9P218 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COL20A1Q9P218 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL20A1Q9P218 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.35■■□□□ 1.49
COL20A1Q9P218 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
COL20A1Q9P218 HLA-L-209ENST00000420110 1011 ntBASIC24.35■■□□□ 1.49
COL20A1Q9P218 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.35■■□□□ 1.49
COL20A1Q9P218 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.35■■□□□ 1.49
COL20A1Q9P218 AC138907.5-202ENST00000569484 235 ntBASIC24.35■■□□□ 1.49
COL20A1Q9P218 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC24.35■■□□□ 1.49
COL20A1Q9P218 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL20A1Q9P218 GXYLT1P5-201ENST00000614548 1189 ntBASIC24.35■■□□□ 1.49
COL20A1Q9P218 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
COL20A1Q9P218 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
COL20A1Q9P218 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COL20A1Q9P218 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL20A1Q9P218 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL20A1Q9P218 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL20A1Q9P218 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
COL20A1Q9P218 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC24.34■■□□□ 1.49
COL20A1Q9P218 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COL20A1Q9P218 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
COL20A1Q9P218 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
COL20A1Q9P218 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC24.34■■□□□ 1.49
COL20A1Q9P218 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.34■■□□□ 1.49
COL20A1Q9P218 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.34■■□□□ 1.49
COL20A1Q9P218 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
COL20A1Q9P218 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC24.34■■□□□ 1.49
COL20A1Q9P218 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC24.34■■□□□ 1.49
COL20A1Q9P218 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
COL20A1Q9P218 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COL20A1Q9P218 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
COL20A1Q9P218 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
COL20A1Q9P218 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
COL20A1Q9P218 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
COL20A1Q9P218 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.33■■□□□ 1.49
COL20A1Q9P218 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.33■■□□□ 1.49
COL20A1Q9P218 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
COL20A1Q9P218 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
COL20A1Q9P218 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
COL20A1Q9P218 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
COL20A1Q9P218 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.33■■□□□ 1.49
COL20A1Q9P218 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.33■■□□□ 1.49
COL20A1Q9P218 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.33■■□□□ 1.49
COL20A1Q9P218 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC24.33■■□□□ 1.49
COL20A1Q9P218 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
COL20A1Q9P218 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
COL20A1Q9P218 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
COL20A1Q9P218 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.32■■□□□ 1.48
COL20A1Q9P218 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.32■■□□□ 1.48
COL20A1Q9P218 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL20A1Q9P218 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC24.32■■□□□ 1.48
COL20A1Q9P218 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.32■■□□□ 1.48
COL20A1Q9P218 DUX4L16-201ENST00000555130 1264 ntBASIC24.32■■□□□ 1.48
COL20A1Q9P218 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC24.32■■□□□ 1.48
COL20A1Q9P218 MYCNOS-205ENST00000641950 531 ntBASIC24.32■■□□□ 1.48
COL20A1Q9P218 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
COL20A1Q9P218 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL20A1Q9P218 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC24.32■■□□□ 1.48
COL20A1Q9P218 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC24.32■■□□□ 1.48
COL20A1Q9P218 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL20A1Q9P218 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL20A1Q9P218 AC127496.7-201ENST00000625110 1798 ntBASIC24.31■■□□□ 1.48
COL20A1Q9P218 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
COL20A1Q9P218 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
COL20A1Q9P218 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.31■■□□□ 1.48
COL20A1Q9P218 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
COL20A1Q9P218 NAA20-201ENST00000310450 920 ntTSL 2 BASIC24.31■■□□□ 1.48
COL20A1Q9P218 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC24.31■■□□□ 1.48
COL20A1Q9P218 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
COL20A1Q9P218 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
COL20A1Q9P218 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
COL20A1Q9P218 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
COL20A1Q9P218 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
COL20A1Q9P218 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
COL20A1Q9P218 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
COL20A1Q9P218 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
COL20A1Q9P218 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.3■■□□□ 1.48
COL20A1Q9P218 AC053503.5-201ENST00000601508 636 ntBASIC24.3■■□□□ 1.48
COL20A1Q9P218 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.3■■□□□ 1.48
COL20A1Q9P218 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
COL20A1Q9P218 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms