Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD9Q9P000 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.14■□□□□ 0.49
COMMD9Q9P000 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.14■□□□□ 0.49
COMMD9Q9P000 AC010980.1-201ENST00000587192 1142 ntBASIC18.14■□□□□ 0.49
COMMD9Q9P000 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD9Q9P000 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
COMMD9Q9P000 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
COMMD9Q9P000 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.14■□□□□ 0.49
COMMD9Q9P000 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.14■□□□□ 0.49
COMMD9Q9P000 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD9Q9P000 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD9Q9P000 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD9Q9P000 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
COMMD9Q9P000 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
COMMD9Q9P000 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD9Q9P000 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD9Q9P000 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD9Q9P000 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD9Q9P000 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD9Q9P000 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD9Q9P000 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD9Q9P000 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD9Q9P000 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD9Q9P000 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD9Q9P000 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD9Q9P000 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.13■□□□□ 0.49
COMMD9Q9P000 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.13■□□□□ 0.49
COMMD9Q9P000 MIR4508-201ENST00000584178 70 ntBASIC18.13■□□□□ 0.49
COMMD9Q9P000 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
COMMD9Q9P000 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD9Q9P000 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD9Q9P000 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COMMD9Q9P000 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
COMMD9Q9P000 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.12■□□□□ 0.49
COMMD9Q9P000 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.12■□□□□ 0.49
COMMD9Q9P000 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.12■□□□□ 0.49
COMMD9Q9P000 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COMMD9Q9P000 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COMMD9Q9P000 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
COMMD9Q9P000 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.12■□□□□ 0.49
COMMD9Q9P000 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.12■□□□□ 0.49
COMMD9Q9P000 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
COMMD9Q9P000 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COMMD9Q9P000 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
COMMD9Q9P000 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COMMD9Q9P000 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
COMMD9Q9P000 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COMMD9Q9P000 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD9Q9P000 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.11■□□□□ 0.49
COMMD9Q9P000 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD9Q9P000 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.11■□□□□ 0.49
COMMD9Q9P000 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.11■□□□□ 0.49
COMMD9Q9P000 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.11■□□□□ 0.49
COMMD9Q9P000 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
COMMD9Q9P000 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
COMMD9Q9P000 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
COMMD9Q9P000 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD9Q9P000 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD9Q9P000 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.11■□□□□ 0.49
COMMD9Q9P000 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD9Q9P000 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD9Q9P000 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD9Q9P000 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD9Q9P000 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD9Q9P000 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.1■□□□□ 0.49
COMMD9Q9P000 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
COMMD9Q9P000 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD9Q9P000 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.1■□□□□ 0.49
COMMD9Q9P000 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.1■□□□□ 0.49
COMMD9Q9P000 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD9Q9P000 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD9Q9P000 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD9Q9P000 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD9Q9P000 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
COMMD9Q9P000 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD9Q9P000 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD9Q9P000 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD9Q9P000 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
COMMD9Q9P000 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD9Q9P000 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD9Q9P000 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.09■□□□□ 0.49
COMMD9Q9P000 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
COMMD9Q9P000 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
COMMD9Q9P000 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD9Q9P000 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD9Q9P000 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.09■□□□□ 0.49
COMMD9Q9P000 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.09■□□□□ 0.49
COMMD9Q9P000 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
COMMD9Q9P000 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD9Q9P000 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD9Q9P000 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD9Q9P000 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
COMMD9Q9P000 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD9Q9P000 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD9Q9P000 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
COMMD9Q9P000 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
COMMD9Q9P000 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COMMD9Q9P000 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COMMD9Q9P000 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COMMD9Q9P000 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms