Protein–RNA interactions for Protein: Q9H8M7

MINDY3, Ubiquitin carboxyl-terminal hydrolase MINDY-3, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3Q9H8M7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
MINDY3Q9H8M7 CDCA4P2-201ENST00000441182 718 ntBASIC23.46■■□□□ 1.35
MINDY3Q9H8M7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.46■■□□□ 1.35
MINDY3Q9H8M7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
MINDY3Q9H8M7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
MINDY3Q9H8M7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.46■■□□□ 1.35
MINDY3Q9H8M7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.46■■□□□ 1.35
MINDY3Q9H8M7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.46■■□□□ 1.35
MINDY3Q9H8M7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
MINDY3Q9H8M7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
MINDY3Q9H8M7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
MINDY3Q9H8M7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.35
MINDY3Q9H8M7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
MINDY3Q9H8M7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
MINDY3Q9H8M7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
MINDY3Q9H8M7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
MINDY3Q9H8M7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.45■■□□□ 1.34
MINDY3Q9H8M7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.45■■□□□ 1.34
MINDY3Q9H8M7 AC073111.5-205ENST00000641717 521 ntBASIC23.45■■□□□ 1.34
MINDY3Q9H8M7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.45■■□□□ 1.34
MINDY3Q9H8M7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
MINDY3Q9H8M7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
MINDY3Q9H8M7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
MINDY3Q9H8M7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.44■■□□□ 1.34
MINDY3Q9H8M7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
MINDY3Q9H8M7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
MINDY3Q9H8M7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.44■■□□□ 1.34
MINDY3Q9H8M7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
MINDY3Q9H8M7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
MINDY3Q9H8M7 AP001160.3-201ENST00000601484 763 ntBASIC23.44■■□□□ 1.34
MINDY3Q9H8M7 AC011767.1-201ENST00000617410 1153 ntBASIC23.44■■□□□ 1.34
MINDY3Q9H8M7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
MINDY3Q9H8M7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
MINDY3Q9H8M7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
MINDY3Q9H8M7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
MINDY3Q9H8M7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
MINDY3Q9H8M7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.44■■□□□ 1.34
MINDY3Q9H8M7 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.43■■□□□ 1.34
MINDY3Q9H8M7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
MINDY3Q9H8M7 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.43■■□□□ 1.34
MINDY3Q9H8M7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
MINDY3Q9H8M7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.43■■□□□ 1.34
MINDY3Q9H8M7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
MINDY3Q9H8M7 BID-214ENST00000617586 542 ntTSL 5 BASIC23.43■■□□□ 1.34
MINDY3Q9H8M7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.43■■□□□ 1.34
MINDY3Q9H8M7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.43■■□□□ 1.34
MINDY3Q9H8M7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
MINDY3Q9H8M7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.42■■□□□ 1.34
MINDY3Q9H8M7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
MINDY3Q9H8M7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.42■■□□□ 1.34
MINDY3Q9H8M7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
MINDY3Q9H8M7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
MINDY3Q9H8M7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
MINDY3Q9H8M7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.42■■□□□ 1.34
MINDY3Q9H8M7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.42■■□□□ 1.34
MINDY3Q9H8M7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.42■■□□□ 1.34
MINDY3Q9H8M7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
MINDY3Q9H8M7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
MINDY3Q9H8M7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
MINDY3Q9H8M7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
MINDY3Q9H8M7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
MINDY3Q9H8M7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
MINDY3Q9H8M7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.41■■□□□ 1.34
MINDY3Q9H8M7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
MINDY3Q9H8M7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
MINDY3Q9H8M7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
MINDY3Q9H8M7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
MINDY3Q9H8M7 EEF1DP3-203ENST00000566025 782 ntBASIC23.41■■□□□ 1.34
MINDY3Q9H8M7 UBE2DNL-204ENST00000602536 740 ntBASIC23.41■■□□□ 1.34
MINDY3Q9H8M7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
MINDY3Q9H8M7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
MINDY3Q9H8M7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
MINDY3Q9H8M7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
MINDY3Q9H8M7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
MINDY3Q9H8M7 MFSD11-216ENST00000590393 1141 ntBASIC23.4■■□□□ 1.34
MINDY3Q9H8M7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
MINDY3Q9H8M7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
MINDY3Q9H8M7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.4■■□□□ 1.34
MINDY3Q9H8M7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
MINDY3Q9H8M7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
MINDY3Q9H8M7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.4■■□□□ 1.34
MINDY3Q9H8M7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
MINDY3Q9H8M7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
MINDY3Q9H8M7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
MINDY3Q9H8M7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
MINDY3Q9H8M7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
MINDY3Q9H8M7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.39■■□□□ 1.33
MINDY3Q9H8M7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
MINDY3Q9H8M7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.39■■□□□ 1.33
MINDY3Q9H8M7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.39■■□□□ 1.33
MINDY3Q9H8M7 AC138907.5-202ENST00000569484 235 ntBASIC23.39■■□□□ 1.33
MINDY3Q9H8M7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.39■■□□□ 1.33
MINDY3Q9H8M7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
MINDY3Q9H8M7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
MINDY3Q9H8M7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
MINDY3Q9H8M7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
MINDY3Q9H8M7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.39■■□□□ 1.33
MINDY3Q9H8M7 AC026471.6-201ENST00000622954 1905 ntBASIC23.39■■□□□ 1.33
MINDY3Q9H8M7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.39■■□□□ 1.33
MINDY3Q9H8M7 AC092053.2-201ENST00000640557 1818 ntBASIC23.38■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms