Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC38A1Q9H2H9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.83■□□□□ 0.76
SLC38A1Q9H2H9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SLC38A1Q9H2H9 AC008406.3-201ENST00000620001 1374 ntBASIC19.83■□□□□ 0.76
SLC38A1Q9H2H9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC38A1Q9H2H9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC38A1Q9H2H9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC38A1Q9H2H9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.82■□□□□ 0.76
SLC38A1Q9H2H9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.82■□□□□ 0.76
SLC38A1Q9H2H9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC38A1Q9H2H9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC38A1Q9H2H9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.82■□□□□ 0.76
SLC38A1Q9H2H9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC38A1Q9H2H9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.82■□□□□ 0.76
SLC38A1Q9H2H9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.82■□□□□ 0.76
SLC38A1Q9H2H9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.82■□□□□ 0.76
SLC38A1Q9H2H9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC38A1Q9H2H9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC38A1Q9H2H9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC38A1Q9H2H9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.82■□□□□ 0.76
SLC38A1Q9H2H9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC38A1Q9H2H9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SLC38A1Q9H2H9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC38A1Q9H2H9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC38A1Q9H2H9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC38A1Q9H2H9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC38A1Q9H2H9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SLC38A1Q9H2H9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.81■□□□□ 0.76
SLC38A1Q9H2H9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC38A1Q9H2H9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC38A1Q9H2H9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
SLC38A1Q9H2H9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC38A1Q9H2H9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC38A1Q9H2H9 AC104564.3-201ENST00000582367 638 ntBASIC19.81■□□□□ 0.76
SLC38A1Q9H2H9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC38A1Q9H2H9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC38A1Q9H2H9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC38A1Q9H2H9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC38A1Q9H2H9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC38A1Q9H2H9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC38A1Q9H2H9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC38A1Q9H2H9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.8■□□□□ 0.76
SLC38A1Q9H2H9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC38A1Q9H2H9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC38A1Q9H2H9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC38A1Q9H2H9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC38A1Q9H2H9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.8■□□□□ 0.76
SLC38A1Q9H2H9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SLC38A1Q9H2H9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC38A1Q9H2H9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC38A1Q9H2H9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC38A1Q9H2H9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC38A1Q9H2H9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC38A1Q9H2H9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC38A1Q9H2H9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC38A1Q9H2H9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SLC38A1Q9H2H9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.79■□□□□ 0.76
SLC38A1Q9H2H9 AC096631.2-201ENST00000436136 790 ntBASIC19.79■□□□□ 0.76
SLC38A1Q9H2H9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
SLC38A1Q9H2H9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC38A1Q9H2H9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SLC38A1Q9H2H9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC38A1Q9H2H9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC38A1Q9H2H9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.78■□□□□ 0.76
SLC38A1Q9H2H9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC38A1Q9H2H9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SLC38A1Q9H2H9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC38A1Q9H2H9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC38A1Q9H2H9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC38A1Q9H2H9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC38A1Q9H2H9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC38A1Q9H2H9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC38A1Q9H2H9 SMUG1P1-201ENST00000590640 811 ntBASIC19.78■□□□□ 0.76
SLC38A1Q9H2H9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.78■□□□□ 0.76
SLC38A1Q9H2H9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.78■□□□□ 0.76
SLC38A1Q9H2H9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC38A1Q9H2H9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC38A1Q9H2H9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC38A1Q9H2H9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC38A1Q9H2H9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.77■□□□□ 0.76
SLC38A1Q9H2H9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC38A1Q9H2H9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC38A1Q9H2H9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC38A1Q9H2H9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC38A1Q9H2H9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC38A1Q9H2H9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC38A1Q9H2H9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SLC38A1Q9H2H9 IGHV3-19-201ENST00000521488 291 ntBASIC19.77■□□□□ 0.76
SLC38A1Q9H2H9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.77■□□□□ 0.76
SLC38A1Q9H2H9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SLC38A1Q9H2H9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.77■□□□□ 0.76
SLC38A1Q9H2H9 AC126544.1-201ENST00000580842 1059 ntBASIC19.77■□□□□ 0.76
SLC38A1Q9H2H9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC38A1Q9H2H9 AC003102.1-202ENST00000563394 1796 ntBASIC19.77■□□□□ 0.76
SLC38A1Q9H2H9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SLC38A1Q9H2H9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC38A1Q9H2H9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SLC38A1Q9H2H9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC38A1Q9H2H9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC38A1Q9H2H9 AC005229.4-201ENST00000610085 2198 ntBASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms