Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC10.85□□□□□ -0.67
KRTAP3-1Q9BYR8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
KRTAP3-1Q9BYR8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
KRTAP3-1Q9BYR8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC10.85□□□□□ -0.67
KRTAP3-1Q9BYR8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
KRTAP3-1Q9BYR8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
KRTAP3-1Q9BYR8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
KRTAP3-1Q9BYR8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC10.85□□□□□ -0.67
KRTAP3-1Q9BYR8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
KRTAP3-1Q9BYR8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
KRTAP3-1Q9BYR8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC10.85□□□□□ -0.67
KRTAP3-1Q9BYR8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
KRTAP3-1Q9BYR8 AL049796.1-201ENST00000565336 1766 ntBASIC10.85□□□□□ -0.67
KRTAP3-1Q9BYR8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC10.85□□□□□ -0.67
KRTAP3-1Q9BYR8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
KRTAP3-1Q9BYR8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
KRTAP3-1Q9BYR8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC10.83□□□□□ -0.68
KRTAP3-1Q9BYR8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 SERPINA7P1-201ENST00000443077 631 ntBASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 AC133637.1-201ENST00000624115 1537 ntBASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
KRTAP3-1Q9BYR8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms