Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE1Q99829 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE1Q99829 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPNE1Q99829 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.38■■□□□ 1.01
CPNE1Q99829 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE1Q99829 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE1Q99829 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE1Q99829 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE1Q99829 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE1Q99829 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE1Q99829 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.37■■□□□ 1.01
CPNE1Q99829 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.37■■□□□ 1.01
CPNE1Q99829 AC136469.2-201ENST00000623944 1028 ntBASIC21.37■■□□□ 1.01
CPNE1Q99829 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CPNE1Q99829 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE1Q99829 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE1Q99829 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CPNE1Q99829 AF106564.1-201ENST00000607058 2553 ntBASIC21.37■■□□□ 1.01
CPNE1Q99829 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CPNE1Q99829 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE1Q99829 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.36■■□□□ 1.01
CPNE1Q99829 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE1Q99829 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE1Q99829 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE1Q99829 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.36■■□□□ 1.01
CPNE1Q99829 AP005435.1-201ENST00000529293 1178 ntBASIC21.36■■□□□ 1.01
CPNE1Q99829 MIR4466-201ENST00000606121 54 ntBASIC21.36■■□□□ 1.01
CPNE1Q99829 AC011298.3-201ENST00000615796 283 ntBASIC21.36■■□□□ 1.01
CPNE1Q99829 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.36■■□□□ 1.01
CPNE1Q99829 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE1Q99829 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE1Q99829 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE1Q99829 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPNE1Q99829 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.36■■□□□ 1.01
CPNE1Q99829 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE1Q99829 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE1Q99829 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.35■■□□□ 1.01
CPNE1Q99829 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE1Q99829 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE1Q99829 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPNE1Q99829 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.35■■□□□ 1.01
CPNE1Q99829 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.35■■□□□ 1.01
CPNE1Q99829 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.35■■□□□ 1.01
CPNE1Q99829 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CPNE1Q99829 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE1Q99829 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE1Q99829 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE1Q99829 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE1Q99829 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.34■■□□□ 1.01
CPNE1Q99829 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.34■■□□□ 1.01
CPNE1Q99829 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE1Q99829 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE1Q99829 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.34■■□□□ 1.01
CPNE1Q99829 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
CPNE1Q99829 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE1Q99829 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE1Q99829 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE1Q99829 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE1Q99829 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.34■■□□□ 1.01
CPNE1Q99829 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.34■■□□□ 1.01
CPNE1Q99829 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.34■■□□□ 1.01
CPNE1Q99829 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE1Q99829 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE1Q99829 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.34■■□□□ 1.01
CPNE1Q99829 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE1Q99829 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE1Q99829 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.34■■□□□ 1.01
CPNE1Q99829 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
CPNE1Q99829 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPNE1Q99829 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPNE1Q99829 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPNE1Q99829 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CPNE1Q99829 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.33■■□□□ 1.01
CPNE1Q99829 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CPNE1Q99829 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CPNE1Q99829 AP004607.7-201ENST00000527152 1677 ntBASIC21.33■■□□□ 1
CPNE1Q99829 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CPNE1Q99829 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CPNE1Q99829 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CPNE1Q99829 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE1Q99829 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.32■■□□□ 1
CPNE1Q99829 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.32■■□□□ 1
CPNE1Q99829 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE1Q99829 SLC47A1P1-202ENST00000449666 945 ntBASIC21.32■■□□□ 1
CPNE1Q99829 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE1Q99829 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CPNE1Q99829 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.32■■□□□ 1
CPNE1Q99829 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.32■■□□□ 1
CPNE1Q99829 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CPNE1Q99829 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CPNE1Q99829 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.32■■□□□ 1
CPNE1Q99829 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CPNE1Q99829 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.31■■□□□ 1
CPNE1Q99829 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CPNE1Q99829 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE1Q99829 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE1Q99829 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CPNE1Q99829 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE1Q99829 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CPNE1Q99829 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms