Protein–RNA interactions for Protein: Q96M98

PACRG, Parkin coregulated gene protein, humanhuman

Predicted RBP Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGQ96M98 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PACRGQ96M98 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PACRGQ96M98 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PACRGQ96M98 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PACRGQ96M98 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PACRGQ96M98 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.21■□□□□ 0.19
PACRGQ96M98 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PACRGQ96M98 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.21■□□□□ 0.18
PACRGQ96M98 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PACRGQ96M98 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
PACRGQ96M98 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PACRGQ96M98 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.21■□□□□ 0.18
PACRGQ96M98 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PACRGQ96M98 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PACRGQ96M98 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PACRGQ96M98 AC005082.1-201ENST00000413042 2259 ntBASIC16.2■□□□□ 0.18
PACRGQ96M98 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PACRGQ96M98 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PACRGQ96M98 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PACRGQ96M98 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PACRGQ96M98 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC16.2■□□□□ 0.18
PACRGQ96M98 AC021231.2-201ENST00000594613 730 ntBASIC16.2■□□□□ 0.18
PACRGQ96M98 NRG1-221ENST00000614767 762 ntTSL 5 BASIC16.2■□□□□ 0.18
PACRGQ96M98 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PACRGQ96M98 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PACRGQ96M98 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PACRGQ96M98 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PACRGQ96M98 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PACRGQ96M98 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
PACRGQ96M98 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
PACRGQ96M98 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PACRGQ96M98 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PACRGQ96M98 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PACRGQ96M98 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PACRGQ96M98 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PACRGQ96M98 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PACRGQ96M98 ALDH1A3-203ENST00000557963 1670 ntBASIC16.19■□□□□ 0.18
PACRGQ96M98 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
PACRGQ96M98 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PACRGQ96M98 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PACRGQ96M98 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PACRGQ96M98 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PACRGQ96M98 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PACRGQ96M98 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PACRGQ96M98 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PACRGQ96M98 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.19■□□□□ 0.18
PACRGQ96M98 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PACRGQ96M98 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PACRGQ96M98 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.18■□□□□ 0.18
PACRGQ96M98 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PACRGQ96M98 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PACRGQ96M98 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PACRGQ96M98 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PACRGQ96M98 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PACRGQ96M98 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PACRGQ96M98 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PACRGQ96M98 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PACRGQ96M98 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PACRGQ96M98 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PACRGQ96M98 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
PACRGQ96M98 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.18■□□□□ 0.18
PACRGQ96M98 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PACRGQ96M98 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PACRGQ96M98 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PACRGQ96M98 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PACRGQ96M98 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PACRGQ96M98 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PACRGQ96M98 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PACRGQ96M98 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.17■□□□□ 0.18
PACRGQ96M98 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.17■□□□□ 0.18
PACRGQ96M98 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.17■□□□□ 0.18
PACRGQ96M98 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
PACRGQ96M98 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PACRGQ96M98 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PACRGQ96M98 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PACRGQ96M98 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PACRGQ96M98 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.17■□□□□ 0.18
PACRGQ96M98 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
PACRGQ96M98 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PACRGQ96M98 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PACRGQ96M98 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PACRGQ96M98 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PACRGQ96M98 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PACRGQ96M98 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PACRGQ96M98 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PACRGQ96M98 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PACRGQ96M98 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PACRGQ96M98 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC16.16■□□□□ 0.18
PACRGQ96M98 AC008813.1-201ENST00000536597 885 ntBASIC16.16■□□□□ 0.18
PACRGQ96M98 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PACRGQ96M98 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PACRGQ96M98 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PACRGQ96M98 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.16■□□□□ 0.18
PACRGQ96M98 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PACRGQ96M98 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.16■□□□□ 0.18
PACRGQ96M98 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PACRGQ96M98 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PACRGQ96M98 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PACRGQ96M98 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.16■□□□□ 0.18
PACRGQ96M98 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms