Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CALR3Q96L12 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CALR3Q96L12 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CALR3Q96L12 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CALR3Q96L12 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CALR3Q96L12 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.6■■□□□ 1.21
CALR3Q96L12 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CALR3Q96L12 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CALR3Q96L12 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.6■■□□□ 1.21
CALR3Q96L12 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CALR3Q96L12 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.59■■□□□ 1.21
CALR3Q96L12 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
CALR3Q96L12 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.59■■□□□ 1.21
CALR3Q96L12 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
CALR3Q96L12 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.59■■□□□ 1.21
CALR3Q96L12 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CALR3Q96L12 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.59■■□□□ 1.21
CALR3Q96L12 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
CALR3Q96L12 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CALR3Q96L12 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CALR3Q96L12 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.59■■□□□ 1.21
CALR3Q96L12 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
CALR3Q96L12 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
CALR3Q96L12 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CALR3Q96L12 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CALR3Q96L12 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CALR3Q96L12 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
CALR3Q96L12 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
CALR3Q96L12 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CALR3Q96L12 AP005435.1-201ENST00000529293 1178 ntBASIC22.58■■□□□ 1.21
CALR3Q96L12 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
CALR3Q96L12 AL035685.1-201ENST00000636663 812 ntBASIC22.58■■□□□ 1.21
CALR3Q96L12 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CALR3Q96L12 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
CALR3Q96L12 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CALR3Q96L12 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CALR3Q96L12 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CALR3Q96L12 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CALR3Q96L12 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.57■■□□□ 1.2
CALR3Q96L12 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CALR3Q96L12 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CALR3Q96L12 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
CALR3Q96L12 GUSBP5-201ENST00000418136 578 ntBASIC22.57■■□□□ 1.2
CALR3Q96L12 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.57■■□□□ 1.2
CALR3Q96L12 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.57■■□□□ 1.2
CALR3Q96L12 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CALR3Q96L12 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CALR3Q96L12 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CALR3Q96L12 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CALR3Q96L12 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CALR3Q96L12 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CALR3Q96L12 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CALR3Q96L12 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CALR3Q96L12 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CALR3Q96L12 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CALR3Q96L12 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CALR3Q96L12 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CALR3Q96L12 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CALR3Q96L12 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CALR3Q96L12 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.56■■□□□ 1.2
CALR3Q96L12 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CALR3Q96L12 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.56■■□□□ 1.2
CALR3Q96L12 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CALR3Q96L12 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.56■■□□□ 1.2
CALR3Q96L12 AC026471.6-201ENST00000622954 1905 ntBASIC22.56■■□□□ 1.2
CALR3Q96L12 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CALR3Q96L12 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CALR3Q96L12 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CALR3Q96L12 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.55■■□□□ 1.2
CALR3Q96L12 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CALR3Q96L12 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CALR3Q96L12 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CALR3Q96L12 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CALR3Q96L12 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
CALR3Q96L12 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CALR3Q96L12 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CALR3Q96L12 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.55■■□□□ 1.2
CALR3Q96L12 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.55■■□□□ 1.2
CALR3Q96L12 AL512631.2-201ENST00000604634 923 ntBASIC22.55■■□□□ 1.2
CALR3Q96L12 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.55■■□□□ 1.2
CALR3Q96L12 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CALR3Q96L12 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CALR3Q96L12 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CALR3Q96L12 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.55■■□□□ 1.2
CALR3Q96L12 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.54■■□□□ 1.2
CALR3Q96L12 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.54■■□□□ 1.2
CALR3Q96L12 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.54■■□□□ 1.2
CALR3Q96L12 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.54■■□□□ 1.2
CALR3Q96L12 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CALR3Q96L12 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CALR3Q96L12 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CALR3Q96L12 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.53■■□□□ 1.2
CALR3Q96L12 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.53■■□□□ 1.2
CALR3Q96L12 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CALR3Q96L12 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CALR3Q96L12 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.53■■□□□ 1.2
CALR3Q96L12 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.53■■□□□ 1.2
CALR3Q96L12 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.53■■□□□ 1.2
CALR3Q96L12 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CALR3Q96L12 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms