Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC26.31■■□□□ 1.8
SNED1Q8TER0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC26.31■■□□□ 1.8
SNED1Q8TER0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC26.31■■□□□ 1.8
SNED1Q8TER0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SNED1Q8TER0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC26.31■■□□□ 1.8
SNED1Q8TER0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC26.31■■□□□ 1.8
SNED1Q8TER0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SNED1Q8TER0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.3■■□□□ 1.8
SNED1Q8TER0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SNED1Q8TER0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SNED1Q8TER0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
SNED1Q8TER0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SNED1Q8TER0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SNED1Q8TER0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SNED1Q8TER0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SNED1Q8TER0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
SNED1Q8TER0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC26.3■■□□□ 1.8
SNED1Q8TER0 AC053503.5-201ENST00000601508 636 ntBASIC26.3■■□□□ 1.8
SNED1Q8TER0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC26.3■■□□□ 1.8
SNED1Q8TER0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC26.3■■□□□ 1.8
SNED1Q8TER0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
SNED1Q8TER0 AP006587.3-201ENST00000525742 1516 ntBASIC26.29■■□□□ 1.8
SNED1Q8TER0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SNED1Q8TER0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
SNED1Q8TER0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SNED1Q8TER0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC26.29■■□□□ 1.8
SNED1Q8TER0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SNED1Q8TER0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SNED1Q8TER0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SNED1Q8TER0 DUSP5P2-201ENST00000426873 1033 ntBASIC26.29■■□□□ 1.8
SNED1Q8TER0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC26.29■■□□□ 1.8
SNED1Q8TER0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC26.29■■□□□ 1.8
SNED1Q8TER0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SNED1Q8TER0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
SNED1Q8TER0 LINC01960-201ENST00000563759 1884 ntBASIC26.28■■□□□ 1.8
SNED1Q8TER0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC26.28■■□□□ 1.8
SNED1Q8TER0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC26.28■■□□□ 1.8
SNED1Q8TER0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SNED1Q8TER0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SNED1Q8TER0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC26.28■■□□□ 1.8
SNED1Q8TER0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC26.28■■□□□ 1.8
SNED1Q8TER0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC26.28■■□□□ 1.8
SNED1Q8TER0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC26.28■■□□□ 1.8
SNED1Q8TER0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SNED1Q8TER0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SNED1Q8TER0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SNED1Q8TER0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC26.27■■□□□ 1.8
SNED1Q8TER0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC26.27■■□□□ 1.8
SNED1Q8TER0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC26.27■■□□□ 1.8
SNED1Q8TER0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SNED1Q8TER0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
SNED1Q8TER0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC26.27■■□□□ 1.8
SNED1Q8TER0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC26.27■■□□□ 1.8
SNED1Q8TER0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC26.27■■□□□ 1.8
SNED1Q8TER0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
SNED1Q8TER0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC26.27■■□□□ 1.8
SNED1Q8TER0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SNED1Q8TER0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SNED1Q8TER0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC26.26■■□□□ 1.79
SNED1Q8TER0 AC092068.2-201ENST00000590491 1708 ntBASIC26.26■■□□□ 1.79
SNED1Q8TER0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SNED1Q8TER0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC26.26■■□□□ 1.79
SNED1Q8TER0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SNED1Q8TER0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC26.26■■□□□ 1.79
SNED1Q8TER0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SNED1Q8TER0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SNED1Q8TER0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SNED1Q8TER0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SNED1Q8TER0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
SNED1Q8TER0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SNED1Q8TER0 LINC00526-201ENST00000581067 1875 ntBASIC26.25■■□□□ 1.79
SNED1Q8TER0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SNED1Q8TER0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC26.25■■□□□ 1.79
SNED1Q8TER0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC26.25■■□□□ 1.79
SNED1Q8TER0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC26.25■■□□□ 1.79
SNED1Q8TER0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC26.25■■□□□ 1.79
SNED1Q8TER0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SNED1Q8TER0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SNED1Q8TER0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SNED1Q8TER0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
SNED1Q8TER0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC26.24■■□□□ 1.79
SNED1Q8TER0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC26.24■■□□□ 1.79
SNED1Q8TER0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SNED1Q8TER0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNED1Q8TER0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
SNED1Q8TER0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNED1Q8TER0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
SNED1Q8TER0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNED1Q8TER0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNED1Q8TER0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNED1Q8TER0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC26.24■■□□□ 1.79
SNED1Q8TER0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
SNED1Q8TER0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SNED1Q8TER0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
SNED1Q8TER0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC26.23■■□□□ 1.79
SNED1Q8TER0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SNED1Q8TER0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SNED1Q8TER0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SNED1Q8TER0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SNED1Q8TER0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms