Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
PGBD3Q8N328 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PGBD3Q8N328 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PGBD3Q8N328 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PGBD3Q8N328 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PGBD3Q8N328 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.72■■□□□ 1.07
PGBD3Q8N328 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.72■■□□□ 1.07
PGBD3Q8N328 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PGBD3Q8N328 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.72■■□□□ 1.07
PGBD3Q8N328 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PGBD3Q8N328 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.72■■□□□ 1.07
PGBD3Q8N328 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.72■■□□□ 1.07
PGBD3Q8N328 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.72■■□□□ 1.07
PGBD3Q8N328 AC083906.2-201ENST00000511578 360 ntBASIC21.72■■□□□ 1.07
PGBD3Q8N328 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.72■■□□□ 1.07
PGBD3Q8N328 AP001160.3-201ENST00000601484 763 ntBASIC21.72■■□□□ 1.07
PGBD3Q8N328 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PGBD3Q8N328 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PGBD3Q8N328 AC079834.2-201ENST00000609776 1949 ntBASIC21.72■■□□□ 1.07
PGBD3Q8N328 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.72■■□□□ 1.07
PGBD3Q8N328 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.72■■□□□ 1.07
PGBD3Q8N328 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PGBD3Q8N328 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PGBD3Q8N328 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
PGBD3Q8N328 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.71■■□□□ 1.07
PGBD3Q8N328 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PGBD3Q8N328 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PGBD3Q8N328 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.71■■□□□ 1.07
PGBD3Q8N328 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PGBD3Q8N328 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PGBD3Q8N328 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PGBD3Q8N328 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PGBD3Q8N328 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PGBD3Q8N328 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.7■■□□□ 1.07
PGBD3Q8N328 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PGBD3Q8N328 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PGBD3Q8N328 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.7■■□□□ 1.06
PGBD3Q8N328 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.7■■□□□ 1.06
PGBD3Q8N328 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PGBD3Q8N328 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.7■■□□□ 1.06
PGBD3Q8N328 AC005181.1-201ENST00000604782 1256 ntBASIC21.7■■□□□ 1.06
PGBD3Q8N328 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PGBD3Q8N328 ANOS2P-203ENST00000472227 1816 ntBASIC21.7■■□□□ 1.06
PGBD3Q8N328 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PGBD3Q8N328 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PGBD3Q8N328 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PGBD3Q8N328 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PGBD3Q8N328 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.69■■□□□ 1.06
PGBD3Q8N328 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PGBD3Q8N328 ABHD17AP1-201ENST00000358206 933 ntBASIC21.69■■□□□ 1.06
PGBD3Q8N328 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.69■■□□□ 1.06
PGBD3Q8N328 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.69■■□□□ 1.06
PGBD3Q8N328 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.68■■□□□ 1.06
PGBD3Q8N328 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PGBD3Q8N328 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PGBD3Q8N328 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PGBD3Q8N328 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PGBD3Q8N328 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PGBD3Q8N328 CD99P1-205ENST00000527459 561 ntBASIC21.68■■□□□ 1.06
PGBD3Q8N328 DUX4L16-201ENST00000555130 1264 ntBASIC21.68■■□□□ 1.06
PGBD3Q8N328 MYCNOS-205ENST00000641950 531 ntBASIC21.68■■□□□ 1.06
PGBD3Q8N328 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.68■■□□□ 1.06
PGBD3Q8N328 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PGBD3Q8N328 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PGBD3Q8N328 LINC01960-201ENST00000563759 1884 ntBASIC21.68■■□□□ 1.06
PGBD3Q8N328 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.68■■□□□ 1.06
PGBD3Q8N328 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PGBD3Q8N328 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PGBD3Q8N328 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PGBD3Q8N328 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PGBD3Q8N328 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PGBD3Q8N328 AP004607.7-201ENST00000527152 1677 ntBASIC21.67■■□□□ 1.06
PGBD3Q8N328 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PGBD3Q8N328 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.67■■□□□ 1.06
PGBD3Q8N328 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PGBD3Q8N328 SLC29A4P1-201ENST00000398760 971 ntBASIC21.67■■□□□ 1.06
PGBD3Q8N328 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PGBD3Q8N328 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.67■■□□□ 1.06
PGBD3Q8N328 AC079089.2-201ENST00000531211 1277 ntBASIC21.67■■□□□ 1.06
PGBD3Q8N328 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.67■■□□□ 1.06
PGBD3Q8N328 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
PGBD3Q8N328 AL050303.2-201ENST00000619798 666 ntBASIC21.67■■□□□ 1.06
PGBD3Q8N328 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PGBD3Q8N328 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PGBD3Q8N328 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PGBD3Q8N328 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.66■■□□□ 1.06
PGBD3Q8N328 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PGBD3Q8N328 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PGBD3Q8N328 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PGBD3Q8N328 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.66■■□□□ 1.06
PGBD3Q8N328 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PGBD3Q8N328 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.66■■□□□ 1.06
PGBD3Q8N328 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.66■■□□□ 1.06
PGBD3Q8N328 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PGBD3Q8N328 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.66■■□□□ 1.06
PGBD3Q8N328 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.66■■□□□ 1.06
PGBD3Q8N328 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PGBD3Q8N328 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PGBD3Q8N328 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PGBD3Q8N328 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms