Protein–RNA interactions for Protein: Q8N0S2

SYCE1, Synaptonemal complex central element protein 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1Q8N0S2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.59■■□□□ 1.21
SYCE1Q8N0S2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
SYCE1Q8N0S2 AC010141.3-201ENST00000456659 717 ntBASIC22.59■■□□□ 1.21
SYCE1Q8N0S2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.59■■□□□ 1.21
SYCE1Q8N0S2 AC092171.4-201ENST00000609130 632 ntBASIC22.59■■□□□ 1.21
SYCE1Q8N0S2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
SYCE1Q8N0S2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.59■■□□□ 1.21
SYCE1Q8N0S2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.59■■□□□ 1.21
SYCE1Q8N0S2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
SYCE1Q8N0S2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
SYCE1Q8N0S2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SYCE1Q8N0S2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SYCE1Q8N0S2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
SYCE1Q8N0S2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SYCE1Q8N0S2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.58■■□□□ 1.21
SYCE1Q8N0S2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
SYCE1Q8N0S2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.58■■□□□ 1.21
SYCE1Q8N0S2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.58■■□□□ 1.21
SYCE1Q8N0S2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
SYCE1Q8N0S2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SYCE1Q8N0S2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SYCE1Q8N0S2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SYCE1Q8N0S2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SYCE1Q8N0S2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SYCE1Q8N0S2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SYCE1Q8N0S2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SYCE1Q8N0S2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SYCE1Q8N0S2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SYCE1Q8N0S2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SYCE1Q8N0S2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SYCE1Q8N0S2 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.56■■□□□ 1.2
SYCE1Q8N0S2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.56■■□□□ 1.2
SYCE1Q8N0S2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SYCE1Q8N0S2 AL034346.1-201ENST00000568244 1277 ntBASIC22.56■■□□□ 1.2
SYCE1Q8N0S2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SYCE1Q8N0S2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SYCE1Q8N0S2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.56■■□□□ 1.2
SYCE1Q8N0S2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SYCE1Q8N0S2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.56■■□□□ 1.2
SYCE1Q8N0S2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.56■■□□□ 1.2
SYCE1Q8N0S2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SYCE1Q8N0S2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SYCE1Q8N0S2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SYCE1Q8N0S2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SYCE1Q8N0S2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SYCE1Q8N0S2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SYCE1Q8N0S2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.55■■□□□ 1.2
SYCE1Q8N0S2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SYCE1Q8N0S2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SYCE1Q8N0S2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SYCE1Q8N0S2 OXCT2P1-201ENST00000447263 1535 ntBASIC22.55■■□□□ 1.2
SYCE1Q8N0S2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SYCE1Q8N0S2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
SYCE1Q8N0S2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SYCE1Q8N0S2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.55■■□□□ 1.2
SYCE1Q8N0S2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SYCE1Q8N0S2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SYCE1Q8N0S2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SYCE1Q8N0S2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SYCE1Q8N0S2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SYCE1Q8N0S2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.54■■□□□ 1.2
SYCE1Q8N0S2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.54■■□□□ 1.2
SYCE1Q8N0S2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SYCE1Q8N0S2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
SYCE1Q8N0S2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.54■■□□□ 1.2
SYCE1Q8N0S2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
SYCE1Q8N0S2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 SRD5A1P1-201ENST00000442297 786 ntBASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 MIR3621-201ENST00000580529 85 ntBASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SYCE1Q8N0S2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SYCE1Q8N0S2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SYCE1Q8N0S2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
SYCE1Q8N0S2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.52■■□□□ 1.2
SYCE1Q8N0S2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.52■■□□□ 1.2
SYCE1Q8N0S2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SYCE1Q8N0S2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.52■■□□□ 1.2
SYCE1Q8N0S2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SYCE1Q8N0S2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms