Protein–RNA interactions for Protein: Q8IXQ6

PARP9, Poly [ADP-ribose] polymerase 9, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARP9Q8IXQ6 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.51■■□□□ 1.03
PARP9Q8IXQ6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
PARP9Q8IXQ6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PARP9Q8IXQ6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.51■■□□□ 1.03
PARP9Q8IXQ6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.51■■□□□ 1.03
PARP9Q8IXQ6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.51■■□□□ 1.03
PARP9Q8IXQ6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.5■■□□□ 1.03
PARP9Q8IXQ6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PARP9Q8IXQ6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
PARP9Q8IXQ6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PARP9Q8IXQ6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PARP9Q8IXQ6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PARP9Q8IXQ6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PARP9Q8IXQ6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.5■■□□□ 1.03
PARP9Q8IXQ6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.5■■□□□ 1.03
PARP9Q8IXQ6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PARP9Q8IXQ6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PARP9Q8IXQ6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PARP9Q8IXQ6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PARP9Q8IXQ6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PARP9Q8IXQ6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.5■■□□□ 1.03
PARP9Q8IXQ6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.5■■□□□ 1.03
PARP9Q8IXQ6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.5■■□□□ 1.03
PARP9Q8IXQ6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PARP9Q8IXQ6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
PARP9Q8IXQ6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.49■■□□□ 1.03
PARP9Q8IXQ6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PARP9Q8IXQ6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PARP9Q8IXQ6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PARP9Q8IXQ6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PARP9Q8IXQ6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PARP9Q8IXQ6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PARP9Q8IXQ6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PARP9Q8IXQ6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PARP9Q8IXQ6 MIR638-201ENST00000385237 100 ntBASIC21.49■■□□□ 1.03
PARP9Q8IXQ6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PARP9Q8IXQ6 AC096631.2-201ENST00000436136 790 ntBASIC21.49■■□□□ 1.03
PARP9Q8IXQ6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.49■■□□□ 1.03
PARP9Q8IXQ6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PARP9Q8IXQ6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PARP9Q8IXQ6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PARP9Q8IXQ6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PARP9Q8IXQ6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
PARP9Q8IXQ6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PARP9Q8IXQ6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PARP9Q8IXQ6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.48■■□□□ 1.03
PARP9Q8IXQ6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PARP9Q8IXQ6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PARP9Q8IXQ6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
PARP9Q8IXQ6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PARP9Q8IXQ6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.48■■□□□ 1.03
PARP9Q8IXQ6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
PARP9Q8IXQ6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.48■■□□□ 1.03
PARP9Q8IXQ6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PARP9Q8IXQ6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PARP9Q8IXQ6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PARP9Q8IXQ6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PARP9Q8IXQ6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PARP9Q8IXQ6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PARP9Q8IXQ6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PARP9Q8IXQ6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PARP9Q8IXQ6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.47■■□□□ 1.03
PARP9Q8IXQ6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PARP9Q8IXQ6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PARP9Q8IXQ6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.46■■□□□ 1.03
PARP9Q8IXQ6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.46■■□□□ 1.03
PARP9Q8IXQ6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
PARP9Q8IXQ6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PARP9Q8IXQ6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
PARP9Q8IXQ6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PARP9Q8IXQ6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.46■■□□□ 1.03
PARP9Q8IXQ6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PARP9Q8IXQ6 AC110285.6-201ENST00000617652 491 ntBASIC21.46■■□□□ 1.03
PARP9Q8IXQ6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
PARP9Q8IXQ6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PARP9Q8IXQ6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PARP9Q8IXQ6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PARP9Q8IXQ6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
PARP9Q8IXQ6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PARP9Q8IXQ6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
PARP9Q8IXQ6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.03
PARP9Q8IXQ6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
PARP9Q8IXQ6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PARP9Q8IXQ6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.45■■□□□ 1.02
PARP9Q8IXQ6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PARP9Q8IXQ6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PARP9Q8IXQ6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PARP9Q8IXQ6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PARP9Q8IXQ6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PARP9Q8IXQ6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.45■■□□□ 1.02
PARP9Q8IXQ6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
PARP9Q8IXQ6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PARP9Q8IXQ6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.45■■□□□ 1.02
PARP9Q8IXQ6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PARP9Q8IXQ6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.45■■□□□ 1.02
PARP9Q8IXQ6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PARP9Q8IXQ6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PARP9Q8IXQ6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PARP9Q8IXQ6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
PARP9Q8IXQ6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms