Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
APLFQ8IW19 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
APLFQ8IW19 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.03■□□□□ 0.96
APLFQ8IW19 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
APLFQ8IW19 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
APLFQ8IW19 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.03■□□□□ 0.96
APLFQ8IW19 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
APLFQ8IW19 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
APLFQ8IW19 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
APLFQ8IW19 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.03■□□□□ 0.96
APLFQ8IW19 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.03■□□□□ 0.96
APLFQ8IW19 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.03■□□□□ 0.96
APLFQ8IW19 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
APLFQ8IW19 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
APLFQ8IW19 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
APLFQ8IW19 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
APLFQ8IW19 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.03■□□□□ 0.96
APLFQ8IW19 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
APLFQ8IW19 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
APLFQ8IW19 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
APLFQ8IW19 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.02■□□□□ 0.96
APLFQ8IW19 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
APLFQ8IW19 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.02■□□□□ 0.96
APLFQ8IW19 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
APLFQ8IW19 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.02■□□□□ 0.96
APLFQ8IW19 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.02■□□□□ 0.96
APLFQ8IW19 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
APLFQ8IW19 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
APLFQ8IW19 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
APLFQ8IW19 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.02■□□□□ 0.96
APLFQ8IW19 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.02■□□□□ 0.96
APLFQ8IW19 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
APLFQ8IW19 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
APLFQ8IW19 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.02■□□□□ 0.95
APLFQ8IW19 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.02■□□□□ 0.95
APLFQ8IW19 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
APLFQ8IW19 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
APLFQ8IW19 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
APLFQ8IW19 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
APLFQ8IW19 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
APLFQ8IW19 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
APLFQ8IW19 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.01■□□□□ 0.95
APLFQ8IW19 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.01■□□□□ 0.95
APLFQ8IW19 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
APLFQ8IW19 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
APLFQ8IW19 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
APLFQ8IW19 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
APLFQ8IW19 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21■□□□□ 0.95
APLFQ8IW19 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
APLFQ8IW19 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
APLFQ8IW19 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21■□□□□ 0.95
APLFQ8IW19 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
APLFQ8IW19 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
APLFQ8IW19 SP2-202ENST00000613139 908 ntTSL 5 BASIC21■□□□□ 0.95
APLFQ8IW19 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
APLFQ8IW19 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21■□□□□ 0.95
APLFQ8IW19 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
APLFQ8IW19 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
APLFQ8IW19 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
APLFQ8IW19 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
APLFQ8IW19 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
APLFQ8IW19 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
APLFQ8IW19 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21■□□□□ 0.95
APLFQ8IW19 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
APLFQ8IW19 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.99■□□□□ 0.95
APLFQ8IW19 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
APLFQ8IW19 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
APLFQ8IW19 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
APLFQ8IW19 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.99■□□□□ 0.95
APLFQ8IW19 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
APLFQ8IW19 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
APLFQ8IW19 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.99■□□□□ 0.95
APLFQ8IW19 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.99■□□□□ 0.95
APLFQ8IW19 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.99■□□□□ 0.95
APLFQ8IW19 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.99■□□□□ 0.95
APLFQ8IW19 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
APLFQ8IW19 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
APLFQ8IW19 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
APLFQ8IW19 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
APLFQ8IW19 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
APLFQ8IW19 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
APLFQ8IW19 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
APLFQ8IW19 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
APLFQ8IW19 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.98■□□□□ 0.95
APLFQ8IW19 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
APLFQ8IW19 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
APLFQ8IW19 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
APLFQ8IW19 AC034268.1-201ENST00000441047 882 ntBASIC20.98■□□□□ 0.95
APLFQ8IW19 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.98■□□□□ 0.95
APLFQ8IW19 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
APLFQ8IW19 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
APLFQ8IW19 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
APLFQ8IW19 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
APLFQ8IW19 AC139530.1-201ENST00000575312 1977 ntBASIC20.97■□□□□ 0.95
APLFQ8IW19 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.97■□□□□ 0.95
APLFQ8IW19 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.97■□□□□ 0.95
APLFQ8IW19 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
APLFQ8IW19 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
APLFQ8IW19 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
APLFQ8IW19 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms