Protein–RNA interactions for Protein: Q8IUX4

APOBEC3F, DNA dC->dU-editing enzyme APOBEC-3F, humanhuman

Known RBP Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3FQ8IUX4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
APOBEC3FQ8IUX4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
APOBEC3FQ8IUX4 AP006587.3-201ENST00000525742 1516 ntBASIC25.44■■□□□ 1.66
APOBEC3FQ8IUX4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
APOBEC3FQ8IUX4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC25.44■■□□□ 1.66
APOBEC3FQ8IUX4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC25.44■■□□□ 1.66
APOBEC3FQ8IUX4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
APOBEC3FQ8IUX4 RARRES2P4-201ENST00000514074 484 ntBASIC25.44■■□□□ 1.66
APOBEC3FQ8IUX4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC25.44■■□□□ 1.66
APOBEC3FQ8IUX4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC25.44■■□□□ 1.66
APOBEC3FQ8IUX4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC25.44■■□□□ 1.66
APOBEC3FQ8IUX4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
APOBEC3FQ8IUX4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
APOBEC3FQ8IUX4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC25.43■■□□□ 1.66
APOBEC3FQ8IUX4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
APOBEC3FQ8IUX4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.43■■□□□ 1.66
APOBEC3FQ8IUX4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
APOBEC3FQ8IUX4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC25.42■■□□□ 1.66
APOBEC3FQ8IUX4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
APOBEC3FQ8IUX4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC25.42■■□□□ 1.66
APOBEC3FQ8IUX4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
APOBEC3FQ8IUX4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
APOBEC3FQ8IUX4 BX276092.2-201ENST00000417668 665 ntBASIC25.42■■□□□ 1.66
APOBEC3FQ8IUX4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC25.42■■□□□ 1.66
APOBEC3FQ8IUX4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC25.42■■□□□ 1.66
APOBEC3FQ8IUX4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC25.42■■□□□ 1.66
APOBEC3FQ8IUX4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC25.42■■□□□ 1.66
APOBEC3FQ8IUX4 AC120498.10-201ENST00000621827 505 ntBASIC25.42■■□□□ 1.66
APOBEC3FQ8IUX4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC25.42■■□□□ 1.66
APOBEC3FQ8IUX4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
APOBEC3FQ8IUX4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
APOBEC3FQ8IUX4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
APOBEC3FQ8IUX4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
APOBEC3FQ8IUX4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
APOBEC3FQ8IUX4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
APOBEC3FQ8IUX4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC25.41■■□□□ 1.66
APOBEC3FQ8IUX4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
APOBEC3FQ8IUX4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
APOBEC3FQ8IUX4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
APOBEC3FQ8IUX4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
APOBEC3FQ8IUX4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
APOBEC3FQ8IUX4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC25.41■■□□□ 1.66
APOBEC3FQ8IUX4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
APOBEC3FQ8IUX4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
APOBEC3FQ8IUX4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC25.41■■□□□ 1.66
APOBEC3FQ8IUX4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC25.41■■□□□ 1.66
APOBEC3FQ8IUX4 AC083880.1-201ENST00000608266 535 ntBASIC25.41■■□□□ 1.66
APOBEC3FQ8IUX4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
APOBEC3FQ8IUX4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
APOBEC3FQ8IUX4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 MYC-209ENST00000641252 345 ntBASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 LINC00526-201ENST00000581067 1875 ntBASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
APOBEC3FQ8IUX4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
APOBEC3FQ8IUX4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
APOBEC3FQ8IUX4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
APOBEC3FQ8IUX4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
APOBEC3FQ8IUX4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
APOBEC3FQ8IUX4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC25.39■■□□□ 1.66
APOBEC3FQ8IUX4 RPS2P52-201ENST00000469610 820 ntBASIC25.39■■□□□ 1.66
APOBEC3FQ8IUX4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC25.39■■□□□ 1.66
APOBEC3FQ8IUX4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC25.39■■□□□ 1.66
APOBEC3FQ8IUX4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC25.39■■□□□ 1.66
APOBEC3FQ8IUX4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC25.39■■□□□ 1.66
APOBEC3FQ8IUX4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC25.39■■□□□ 1.66
APOBEC3FQ8IUX4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC25.39■■□□□ 1.66
APOBEC3FQ8IUX4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.39■■□□□ 1.65
APOBEC3FQ8IUX4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
APOBEC3FQ8IUX4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
APOBEC3FQ8IUX4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC25.38■■□□□ 1.65
APOBEC3FQ8IUX4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
APOBEC3FQ8IUX4 AC098590.1-201ENST00000468126 897 ntBASIC25.38■■□□□ 1.65
APOBEC3FQ8IUX4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC25.38■■□□□ 1.65
APOBEC3FQ8IUX4 AC097658.1-201ENST00000475555 843 ntBASIC25.38■■□□□ 1.65
APOBEC3FQ8IUX4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC25.38■■□□□ 1.65
APOBEC3FQ8IUX4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC25.38■■□□□ 1.65
APOBEC3FQ8IUX4 AC008175.2-201ENST00000612840 297 ntBASIC25.38■■□□□ 1.65
APOBEC3FQ8IUX4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
APOBEC3FQ8IUX4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms