Protein–RNA interactions for Protein: Q7Z404

TMC4, Transmembrane channel-like protein 4, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC4Q7Z404 AL512625.2-201ENST00000417533 625 ntBASIC26.33■■□□□ 1.81
TMC4Q7Z404 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TMC4Q7Z404 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
TMC4Q7Z404 TBCB-214ENST00000629269 413 ntTSL 5 BASIC26.33■■□□□ 1.81
TMC4Q7Z404 MARS-234ENST00000630571 216 ntTSL 5 BASIC26.33■■□□□ 1.81
TMC4Q7Z404 MARS-235ENST00000630803 183 ntTSL 3 BASIC26.33■■□□□ 1.81
TMC4Q7Z404 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
TMC4Q7Z404 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
TMC4Q7Z404 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
TMC4Q7Z404 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC26.33■■□□□ 1.8
TMC4Q7Z404 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.32■■□□□ 1.8
TMC4Q7Z404 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC26.32■■□□□ 1.8
TMC4Q7Z404 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC26.32■■□□□ 1.8
TMC4Q7Z404 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC26.32■■□□□ 1.8
TMC4Q7Z404 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC26.32■■□□□ 1.8
TMC4Q7Z404 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC26.32■■□□□ 1.8
TMC4Q7Z404 AC120498.10-201ENST00000621827 505 ntBASIC26.32■■□□□ 1.8
TMC4Q7Z404 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
TMC4Q7Z404 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TMC4Q7Z404 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
TMC4Q7Z404 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TMC4Q7Z404 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TMC4Q7Z404 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TMC4Q7Z404 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
TMC4Q7Z404 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TMC4Q7Z404 MIPEPP3-201ENST00000412105 444 ntBASIC26.31■■□□□ 1.8
TMC4Q7Z404 AC098934.4-201ENST00000564127 592 ntBASIC26.31■■□□□ 1.8
TMC4Q7Z404 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC26.31■■□□□ 1.8
TMC4Q7Z404 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TMC4Q7Z404 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TMC4Q7Z404 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TMC4Q7Z404 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TMC4Q7Z404 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
TMC4Q7Z404 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TMC4Q7Z404 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.3■■□□□ 1.8
TMC4Q7Z404 MKRN4P-201ENST00000444706 1521 ntBASIC26.3■■□□□ 1.8
TMC4Q7Z404 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TMC4Q7Z404 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TMC4Q7Z404 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TMC4Q7Z404 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TMC4Q7Z404 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC26.3■■□□□ 1.8
TMC4Q7Z404 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC26.3■■□□□ 1.8
TMC4Q7Z404 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC26.3■■□□□ 1.8
TMC4Q7Z404 AC008175.2-201ENST00000612840 297 ntBASIC26.3■■□□□ 1.8
TMC4Q7Z404 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC26.3■■□□□ 1.8
TMC4Q7Z404 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TMC4Q7Z404 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TMC4Q7Z404 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TMC4Q7Z404 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
TMC4Q7Z404 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
TMC4Q7Z404 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC26.29■■□□□ 1.8
TMC4Q7Z404 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC26.29■■□□□ 1.8
TMC4Q7Z404 AC069236.1-201ENST00000604339 616 ntBASIC26.29■■□□□ 1.8
TMC4Q7Z404 AC008694.1-202ENST00000636953 945 ntBASIC26.29■■□□□ 1.8
TMC4Q7Z404 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
TMC4Q7Z404 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TMC4Q7Z404 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.29■■□□□ 1.8
TMC4Q7Z404 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TMC4Q7Z404 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
TMC4Q7Z404 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
TMC4Q7Z404 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
TMC4Q7Z404 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
TMC4Q7Z404 POU5F1P4-201ENST00000413175 1085 ntBASIC26.28■■□□□ 1.8
TMC4Q7Z404 PPP1R14BP2-201ENST00000426284 444 ntBASIC26.28■■□□□ 1.8
TMC4Q7Z404 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC26.28■■□□□ 1.8
TMC4Q7Z404 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC26.28■■□□□ 1.8
TMC4Q7Z404 AC092118.2-201ENST00000613495 667 ntBASIC26.28■■□□□ 1.8
TMC4Q7Z404 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
TMC4Q7Z404 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
TMC4Q7Z404 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TMC4Q7Z404 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.27■■□□□ 1.8
TMC4Q7Z404 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TMC4Q7Z404 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC26.27■■□□□ 1.8
TMC4Q7Z404 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TMC4Q7Z404 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
TMC4Q7Z404 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC26.27■■□□□ 1.8
TMC4Q7Z404 PLLP-204ENST00000569059 665 ntTSL 3 BASIC26.27■■□□□ 1.8
TMC4Q7Z404 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC26.27■■□□□ 1.8
TMC4Q7Z404 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
TMC4Q7Z404 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
TMC4Q7Z404 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TMC4Q7Z404 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC26.27■■□□□ 1.8
TMC4Q7Z404 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TMC4Q7Z404 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TMC4Q7Z404 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TMC4Q7Z404 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC26.26■■□□□ 1.79
TMC4Q7Z404 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
TMC4Q7Z404 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TMC4Q7Z404 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC26.26■■□□□ 1.79
TMC4Q7Z404 RNF146-206ENST00000480444 843 ntTSL 2 BASIC26.26■■□□□ 1.79
TMC4Q7Z404 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TMC4Q7Z404 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC26.26■■□□□ 1.79
TMC4Q7Z404 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC26.26■■□□□ 1.79
TMC4Q7Z404 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
TMC4Q7Z404 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC26.26■■□□□ 1.79
TMC4Q7Z404 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.25■■□□□ 1.79
TMC4Q7Z404 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TMC4Q7Z404 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TMC4Q7Z404 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TMC4Q7Z404 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms