Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TUBA1AQ71U36 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TUBA1AQ71U36 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.63■□□□□ 0.73
TUBA1AQ71U36 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.63■□□□□ 0.73
TUBA1AQ71U36 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
TUBA1AQ71U36 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA1AQ71U36 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
TUBA1AQ71U36 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA1AQ71U36 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TUBA1AQ71U36 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA1AQ71U36 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TUBA1AQ71U36 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.62■□□□□ 0.73
TUBA1AQ71U36 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA1AQ71U36 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA1AQ71U36 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA1AQ71U36 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.62■□□□□ 0.73
TUBA1AQ71U36 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.62■□□□□ 0.73
TUBA1AQ71U36 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TUBA1AQ71U36 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA1AQ71U36 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA1AQ71U36 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TUBA1AQ71U36 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.61■□□□□ 0.73
TUBA1AQ71U36 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1AQ71U36 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1AQ71U36 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1AQ71U36 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1AQ71U36 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1AQ71U36 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.61■□□□□ 0.73
TUBA1AQ71U36 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1AQ71U36 AC006455.2-201ENST00000429931 906 ntBASIC19.61■□□□□ 0.73
TUBA1AQ71U36 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1AQ71U36 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1AQ71U36 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1AQ71U36 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.61■□□□□ 0.73
TUBA1AQ71U36 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1AQ71U36 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TUBA1AQ71U36 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1AQ71U36 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1AQ71U36 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TUBA1AQ71U36 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TUBA1AQ71U36 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBA1AQ71U36 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBA1AQ71U36 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBA1AQ71U36 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TUBA1AQ71U36 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
TUBA1AQ71U36 AC096631.2-201ENST00000436136 790 ntBASIC19.6■□□□□ 0.73
TUBA1AQ71U36 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.6■□□□□ 0.73
TUBA1AQ71U36 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.6■□□□□ 0.73
TUBA1AQ71U36 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBA1AQ71U36 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TUBA1AQ71U36 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.6■□□□□ 0.73
TUBA1AQ71U36 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TUBA1AQ71U36 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TUBA1AQ71U36 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TUBA1AQ71U36 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TUBA1AQ71U36 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TUBA1AQ71U36 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.6■□□□□ 0.73
TUBA1AQ71U36 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBA1AQ71U36 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TUBA1AQ71U36 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TUBA1AQ71U36 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TUBA1AQ71U36 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.59■□□□□ 0.73
TUBA1AQ71U36 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.59■□□□□ 0.73
TUBA1AQ71U36 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.59■□□□□ 0.73
TUBA1AQ71U36 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TUBA1AQ71U36 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TUBA1AQ71U36 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TUBA1AQ71U36 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.59■□□□□ 0.73
TUBA1AQ71U36 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TUBA1AQ71U36 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.59■□□□□ 0.73
TUBA1AQ71U36 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TUBA1AQ71U36 AL157384.1-201ENST00000445995 2473 ntBASIC19.59■□□□□ 0.73
TUBA1AQ71U36 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TUBA1AQ71U36 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
TUBA1AQ71U36 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TUBA1AQ71U36 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TUBA1AQ71U36 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TUBA1AQ71U36 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.58■□□□□ 0.73
TUBA1AQ71U36 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
TUBA1AQ71U36 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TUBA1AQ71U36 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
TUBA1AQ71U36 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TUBA1AQ71U36 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.58■□□□□ 0.72
TUBA1AQ71U36 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.58■□□□□ 0.72
TUBA1AQ71U36 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TUBA1AQ71U36 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TUBA1AQ71U36 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TUBA1AQ71U36 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.58■□□□□ 0.72
TUBA1AQ71U36 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TUBA1AQ71U36 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.58■□□□□ 0.72
TUBA1AQ71U36 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TUBA1AQ71U36 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TUBA1AQ71U36 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TUBA1AQ71U36 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.57■□□□□ 0.72
TUBA1AQ71U36 AC009086.3-201ENST00000623486 1008 ntBASIC19.57■□□□□ 0.72
TUBA1AQ71U36 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
TUBA1AQ71U36 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.57■□□□□ 0.72
TUBA1AQ71U36 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TUBA1AQ71U36 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TUBA1AQ71U36 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms