Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FAM53AQ6NSI3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
FAM53AQ6NSI3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FAM53AQ6NSI3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FAM53AQ6NSI3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FAM53AQ6NSI3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
FAM53AQ6NSI3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FAM53AQ6NSI3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FAM53AQ6NSI3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
FAM53AQ6NSI3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FAM53AQ6NSI3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FAM53AQ6NSI3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FAM53AQ6NSI3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.72■□□□□ 0.43
FAM53AQ6NSI3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FAM53AQ6NSI3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FAM53AQ6NSI3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
FAM53AQ6NSI3 AF106564.1-201ENST00000607058 2553 ntBASIC17.72■□□□□ 0.43
FAM53AQ6NSI3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
FAM53AQ6NSI3 OXCT2P1-201ENST00000447263 1535 ntBASIC17.72■□□□□ 0.43
FAM53AQ6NSI3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FAM53AQ6NSI3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FAM53AQ6NSI3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
FAM53AQ6NSI3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.71■□□□□ 0.43
FAM53AQ6NSI3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FAM53AQ6NSI3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.71■□□□□ 0.43
FAM53AQ6NSI3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.71■□□□□ 0.43
FAM53AQ6NSI3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
FAM53AQ6NSI3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
FAM53AQ6NSI3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FAM53AQ6NSI3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FAM53AQ6NSI3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.71■□□□□ 0.43
FAM53AQ6NSI3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.71■□□□□ 0.43
FAM53AQ6NSI3 AC068587.7-201ENST00000641602 218 ntBASIC17.71■□□□□ 0.43
FAM53AQ6NSI3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FAM53AQ6NSI3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
FAM53AQ6NSI3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FAM53AQ6NSI3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
FAM53AQ6NSI3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FAM53AQ6NSI3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FAM53AQ6NSI3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FAM53AQ6NSI3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
FAM53AQ6NSI3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.7■□□□□ 0.42
FAM53AQ6NSI3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.7■□□□□ 0.42
FAM53AQ6NSI3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FAM53AQ6NSI3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.7■□□□□ 0.42
FAM53AQ6NSI3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.7■□□□□ 0.42
FAM53AQ6NSI3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FAM53AQ6NSI3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FAM53AQ6NSI3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.7■□□□□ 0.42
FAM53AQ6NSI3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
FAM53AQ6NSI3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.7■□□□□ 0.42
FAM53AQ6NSI3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
FAM53AQ6NSI3 AC135279.3-201ENST00000610945 1311 ntBASIC17.7■□□□□ 0.42
FAM53AQ6NSI3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.7■□□□□ 0.42
FAM53AQ6NSI3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FAM53AQ6NSI3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FAM53AQ6NSI3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FAM53AQ6NSI3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FAM53AQ6NSI3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
FAM53AQ6NSI3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.69■□□□□ 0.42
FAM53AQ6NSI3 PBX2P1-201ENST00000493219 1291 ntBASIC17.69■□□□□ 0.42
FAM53AQ6NSI3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.69■□□□□ 0.42
FAM53AQ6NSI3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
FAM53AQ6NSI3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.69■□□□□ 0.42
FAM53AQ6NSI3 AC087239.1-201ENST00000622671 572 ntBASIC17.69■□□□□ 0.42
FAM53AQ6NSI3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FAM53AQ6NSI3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
FAM53AQ6NSI3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.69■□□□□ 0.42
FAM53AQ6NSI3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FAM53AQ6NSI3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FAM53AQ6NSI3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FAM53AQ6NSI3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
FAM53AQ6NSI3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FAM53AQ6NSI3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
FAM53AQ6NSI3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FAM53AQ6NSI3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FAM53AQ6NSI3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
FAM53AQ6NSI3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FAM53AQ6NSI3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FAM53AQ6NSI3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.68■□□□□ 0.42
FAM53AQ6NSI3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.68■□□□□ 0.42
FAM53AQ6NSI3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
FAM53AQ6NSI3 AP005435.1-201ENST00000529293 1178 ntBASIC17.68■□□□□ 0.42
FAM53AQ6NSI3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.68■□□□□ 0.42
FAM53AQ6NSI3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.68■□□□□ 0.42
FAM53AQ6NSI3 AC008764.7-201ENST00000593779 1081 ntBASIC17.68■□□□□ 0.42
FAM53AQ6NSI3 AC110285.6-201ENST00000617652 491 ntBASIC17.68■□□□□ 0.42
FAM53AQ6NSI3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
FAM53AQ6NSI3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
FAM53AQ6NSI3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
FAM53AQ6NSI3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.67■□□□□ 0.42
FAM53AQ6NSI3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
FAM53AQ6NSI3 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.67■□□□□ 0.42
FAM53AQ6NSI3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.67■□□□□ 0.42
FAM53AQ6NSI3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FAM53AQ6NSI3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
FAM53AQ6NSI3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
FAM53AQ6NSI3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FAM53AQ6NSI3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FAM53AQ6NSI3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms