Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LPCAT4Q643R3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.16■□□□□ 0.82
LPCAT4Q643R3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LPCAT4Q643R3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LPCAT4Q643R3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LPCAT4Q643R3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.15■□□□□ 0.82
LPCAT4Q643R3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
LPCAT4Q643R3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
LPCAT4Q643R3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.15■□□□□ 0.82
LPCAT4Q643R3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.15■□□□□ 0.82
LPCAT4Q643R3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
LPCAT4Q643R3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.15■□□□□ 0.82
LPCAT4Q643R3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
LPCAT4Q643R3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.15■□□□□ 0.82
LPCAT4Q643R3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LPCAT4Q643R3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LPCAT4Q643R3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
LPCAT4Q643R3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LPCAT4Q643R3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LPCAT4Q643R3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
LPCAT4Q643R3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
LPCAT4Q643R3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.14■□□□□ 0.82
LPCAT4Q643R3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LPCAT4Q643R3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LPCAT4Q643R3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
LPCAT4Q643R3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.14■□□□□ 0.81
LPCAT4Q643R3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.14■□□□□ 0.81
LPCAT4Q643R3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.14■□□□□ 0.81
LPCAT4Q643R3 GABARAPL3-202ENST00000624044 1851 ntBASIC20.14■□□□□ 0.81
LPCAT4Q643R3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LPCAT4Q643R3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LPCAT4Q643R3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LPCAT4Q643R3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LPCAT4Q643R3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
LPCAT4Q643R3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
LPCAT4Q643R3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LPCAT4Q643R3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LPCAT4Q643R3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LPCAT4Q643R3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LPCAT4Q643R3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LPCAT4Q643R3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LPCAT4Q643R3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.13■□□□□ 0.81
LPCAT4Q643R3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LPCAT4Q643R3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
LPCAT4Q643R3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
LPCAT4Q643R3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
LPCAT4Q643R3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LPCAT4Q643R3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LPCAT4Q643R3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LPCAT4Q643R3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
LPCAT4Q643R3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LPCAT4Q643R3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LPCAT4Q643R3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.13■□□□□ 0.81
LPCAT4Q643R3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LPCAT4Q643R3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LPCAT4Q643R3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
LPCAT4Q643R3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LPCAT4Q643R3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LPCAT4Q643R3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LPCAT4Q643R3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LPCAT4Q643R3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LPCAT4Q643R3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LPCAT4Q643R3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LPCAT4Q643R3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LPCAT4Q643R3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LPCAT4Q643R3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LPCAT4Q643R3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.12■□□□□ 0.81
LPCAT4Q643R3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LPCAT4Q643R3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
LPCAT4Q643R3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.12■□□□□ 0.81
LPCAT4Q643R3 AC073314.1-201ENST00000568729 2216 ntBASIC20.12■□□□□ 0.81
LPCAT4Q643R3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LPCAT4Q643R3 AP005212.1-201ENST00000581547 1997 ntBASIC20.12■□□□□ 0.81
LPCAT4Q643R3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
LPCAT4Q643R3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.11■□□□□ 0.81
LPCAT4Q643R3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.11■□□□□ 0.81
LPCAT4Q643R3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.11■□□□□ 0.81
LPCAT4Q643R3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
LPCAT4Q643R3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LPCAT4Q643R3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LPCAT4Q643R3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LPCAT4Q643R3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.11■□□□□ 0.81
LPCAT4Q643R3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LPCAT4Q643R3 AF131216.4-201ENST00000638924 1588 ntBASIC20.11■□□□□ 0.81
LPCAT4Q643R3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.11■□□□□ 0.81
LPCAT4Q643R3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LPCAT4Q643R3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LPCAT4Q643R3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.11■□□□□ 0.81
LPCAT4Q643R3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LPCAT4Q643R3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LPCAT4Q643R3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LPCAT4Q643R3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LPCAT4Q643R3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LPCAT4Q643R3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
LPCAT4Q643R3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LPCAT4Q643R3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LPCAT4Q643R3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LPCAT4Q643R3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LPCAT4Q643R3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LPCAT4Q643R3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms