Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ANOS2P-203ENST00000472227 1816 ntBASIC21.17■□□□□ 0.98
LYSMD4Q5XG99 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD4Q5XG99 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYSMD4Q5XG99 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.16■□□□□ 0.98
LYSMD4Q5XG99 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
LYSMD4Q5XG99 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LYSMD4Q5XG99 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.16■□□□□ 0.98
LYSMD4Q5XG99 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LYSMD4Q5XG99 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LYSMD4Q5XG99 AC093787.1-201ENST00000450396 207 ntBASIC21.16■□□□□ 0.98
LYSMD4Q5XG99 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.16■□□□□ 0.98
LYSMD4Q5XG99 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.16■□□□□ 0.98
LYSMD4Q5XG99 AC120498.10-201ENST00000621827 505 ntBASIC21.16■□□□□ 0.98
LYSMD4Q5XG99 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
LYSMD4Q5XG99 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LYSMD4Q5XG99 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
LYSMD4Q5XG99 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD4Q5XG99 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.15■□□□□ 0.98
LYSMD4Q5XG99 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD4Q5XG99 AL512625.2-201ENST00000417533 625 ntBASIC21.15■□□□□ 0.98
LYSMD4Q5XG99 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.15■□□□□ 0.98
LYSMD4Q5XG99 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.15■□□□□ 0.98
LYSMD4Q5XG99 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
LYSMD4Q5XG99 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.15■□□□□ 0.98
LYSMD4Q5XG99 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.15■□□□□ 0.98
LYSMD4Q5XG99 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD4Q5XG99 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD4Q5XG99 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD4Q5XG99 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD4Q5XG99 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD4Q5XG99 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LYSMD4Q5XG99 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.14■□□□□ 0.98
LYSMD4Q5XG99 AP006587.3-201ENST00000525742 1516 ntBASIC21.14■□□□□ 0.98
LYSMD4Q5XG99 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LYSMD4Q5XG99 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.14■□□□□ 0.97
LYSMD4Q5XG99 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
LYSMD4Q5XG99 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LYSMD4Q5XG99 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
LYSMD4Q5XG99 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.14■□□□□ 0.97
LYSMD4Q5XG99 RARRES2P4-201ENST00000514074 484 ntBASIC21.14■□□□□ 0.97
LYSMD4Q5XG99 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
LYSMD4Q5XG99 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.14■□□□□ 0.97
LYSMD4Q5XG99 AC092068.2-201ENST00000590491 1708 ntBASIC21.14■□□□□ 0.97
LYSMD4Q5XG99 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.14■□□□□ 0.97
LYSMD4Q5XG99 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.14■□□□□ 0.97
LYSMD4Q5XG99 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.13■□□□□ 0.97
LYSMD4Q5XG99 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD4Q5XG99 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD4Q5XG99 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
LYSMD4Q5XG99 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD4Q5XG99 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD4Q5XG99 BX276092.2-201ENST00000417668 665 ntBASIC21.13■□□□□ 0.97
LYSMD4Q5XG99 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.13■□□□□ 0.97
LYSMD4Q5XG99 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.13■□□□□ 0.97
LYSMD4Q5XG99 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD4Q5XG99 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.13■□□□□ 0.97
LYSMD4Q5XG99 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD4Q5XG99 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD4Q5XG99 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD4Q5XG99 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD4Q5XG99 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LYSMD4Q5XG99 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LYSMD4Q5XG99 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.12■□□□□ 0.97
LYSMD4Q5XG99 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.12■□□□□ 0.97
LYSMD4Q5XG99 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.12■□□□□ 0.97
LYSMD4Q5XG99 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LYSMD4Q5XG99 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LYSMD4Q5XG99 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.12■□□□□ 0.97
LYSMD4Q5XG99 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LYSMD4Q5XG99 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.12■□□□□ 0.97
LYSMD4Q5XG99 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LYSMD4Q5XG99 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
LYSMD4Q5XG99 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.12■□□□□ 0.97
LYSMD4Q5XG99 AC008175.2-201ENST00000612840 297 ntBASIC21.12■□□□□ 0.97
LYSMD4Q5XG99 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.12■□□□□ 0.97
LYSMD4Q5XG99 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LYSMD4Q5XG99 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LYSMD4Q5XG99 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LYSMD4Q5XG99 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.12■□□□□ 0.97
LYSMD4Q5XG99 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LYSMD4Q5XG99 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LYSMD4Q5XG99 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.12■□□□□ 0.97
LYSMD4Q5XG99 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LYSMD4Q5XG99 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LYSMD4Q5XG99 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LYSMD4Q5XG99 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LYSMD4Q5XG99 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LYSMD4Q5XG99 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LYSMD4Q5XG99 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.11■□□□□ 0.97
LYSMD4Q5XG99 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
LYSMD4Q5XG99 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.11■□□□□ 0.97
LYSMD4Q5XG99 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.11■□□□□ 0.97
LYSMD4Q5XG99 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.11■□□□□ 0.97
LYSMD4Q5XG99 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.11■□□□□ 0.97
LYSMD4Q5XG99 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.11■□□□□ 0.97
LYSMD4Q5XG99 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.11■□□□□ 0.97
LYSMD4Q5XG99 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.11■□□□□ 0.97
LYSMD4Q5XG99 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.11■□□□□ 0.97
LYSMD4Q5XG99 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.11■□□□□ 0.97
LYSMD4Q5XG99 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms