Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
USH1GQ495M9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.63■■□□□ 1.53
USH1GQ495M9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
USH1GQ495M9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
USH1GQ495M9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC24.63■■□□□ 1.53
USH1GQ495M9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.63■■□□□ 1.53
USH1GQ495M9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
USH1GQ495M9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
USH1GQ495M9 AC080038.1-201ENST00000611274 1154 ntBASIC24.63■■□□□ 1.53
USH1GQ495M9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC24.63■■□□□ 1.53
USH1GQ495M9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
USH1GQ495M9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.63■■□□□ 1.53
USH1GQ495M9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
USH1GQ495M9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
USH1GQ495M9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
USH1GQ495M9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
USH1GQ495M9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC24.63■■□□□ 1.53
USH1GQ495M9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
USH1GQ495M9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
USH1GQ495M9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
USH1GQ495M9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC24.62■■□□□ 1.53
USH1GQ495M9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
USH1GQ495M9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
USH1GQ495M9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.62■■□□□ 1.53
USH1GQ495M9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.62■■□□□ 1.53
USH1GQ495M9 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.62■■□□□ 1.53
USH1GQ495M9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.62■■□□□ 1.53
USH1GQ495M9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC24.62■■□□□ 1.53
USH1GQ495M9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
USH1GQ495M9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
USH1GQ495M9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
USH1GQ495M9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
USH1GQ495M9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.61■■□□□ 1.53
USH1GQ495M9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
USH1GQ495M9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
USH1GQ495M9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
USH1GQ495M9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
USH1GQ495M9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
USH1GQ495M9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
USH1GQ495M9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
USH1GQ495M9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.61■■□□□ 1.53
USH1GQ495M9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
USH1GQ495M9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.61■■□□□ 1.53
USH1GQ495M9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
USH1GQ495M9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC24.61■■□□□ 1.53
USH1GQ495M9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC24.61■■□□□ 1.53
USH1GQ495M9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
USH1GQ495M9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
USH1GQ495M9 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.61■■□□□ 1.53
USH1GQ495M9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
USH1GQ495M9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
USH1GQ495M9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.6■■□□□ 1.53
USH1GQ495M9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
USH1GQ495M9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
USH1GQ495M9 BID-214ENST00000617586 542 ntTSL 5 BASIC24.6■■□□□ 1.53
USH1GQ495M9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
USH1GQ495M9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
USH1GQ495M9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC24.6■■□□□ 1.53
USH1GQ495M9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC24.6■■□□□ 1.53
USH1GQ495M9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC24.6■■□□□ 1.53
USH1GQ495M9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
USH1GQ495M9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
USH1GQ495M9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
USH1GQ495M9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
USH1GQ495M9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
USH1GQ495M9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
USH1GQ495M9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
USH1GQ495M9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
USH1GQ495M9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
USH1GQ495M9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
USH1GQ495M9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.58■■□□□ 1.53
USH1GQ495M9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
USH1GQ495M9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.58■■□□□ 1.53
USH1GQ495M9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
USH1GQ495M9 AC127496.7-201ENST00000625110 1798 ntBASIC24.58■■□□□ 1.53
USH1GQ495M9 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
USH1GQ495M9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.58■■□□□ 1.53
USH1GQ495M9 AP001160.3-201ENST00000601484 763 ntBASIC24.58■■□□□ 1.53
USH1GQ495M9 AC073111.5-205ENST00000641717 521 ntBASIC24.58■■□□□ 1.53
USH1GQ495M9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
USH1GQ495M9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
USH1GQ495M9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC24.58■■□□□ 1.52
USH1GQ495M9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
USH1GQ495M9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
USH1GQ495M9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
USH1GQ495M9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.57■■□□□ 1.52
USH1GQ495M9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
USH1GQ495M9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
USH1GQ495M9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
USH1GQ495M9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC24.57■■□□□ 1.52
USH1GQ495M9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24.57■■□□□ 1.52
USH1GQ495M9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
USH1GQ495M9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.57■■□□□ 1.52
USH1GQ495M9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
USH1GQ495M9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
USH1GQ495M9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
USH1GQ495M9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC24.57■■□□□ 1.52
USH1GQ495M9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC24.57■■□□□ 1.52
USH1GQ495M9 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.56■■□□□ 1.52
USH1GQ495M9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms