Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.78■□□□□ 0.6
RAB1AP62820 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB1AP62820 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RAB1AP62820 AL034346.1-201ENST00000568244 1277 ntBASIC18.78■□□□□ 0.6
RAB1AP62820 MIR6084-201ENST00000622012 110 ntBASIC18.78■□□□□ 0.6
RAB1AP62820 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB1AP62820 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB1AP62820 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB1AP62820 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB1AP62820 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB1AP62820 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB1AP62820 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RAB1AP62820 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB1AP62820 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB1AP62820 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB1AP62820 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB1AP62820 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB1AP62820 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB1AP62820 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB1AP62820 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.77■□□□□ 0.6
RAB1AP62820 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.77■□□□□ 0.6
RAB1AP62820 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB1AP62820 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.77■□□□□ 0.6
RAB1AP62820 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB1AP62820 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB1AP62820 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB1AP62820 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB1AP62820 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB1AP62820 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB1AP62820 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RAB1AP62820 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAB1AP62820 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB1AP62820 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB1AP62820 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RAB1AP62820 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB1AP62820 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB1AP62820 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.76■□□□□ 0.59
RAB1AP62820 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
RAB1AP62820 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB1AP62820 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB1AP62820 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RAB1AP62820 EP400NL-214ENST00000641289 2402 ntBASIC18.76■□□□□ 0.59
RAB1AP62820 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB1AP62820 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB1AP62820 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RAB1AP62820 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB1AP62820 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB1AP62820 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB1AP62820 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB1AP62820 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB1AP62820 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB1AP62820 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB1AP62820 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB1AP62820 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB1AP62820 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB1AP62820 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB1AP62820 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RAB1AP62820 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB1AP62820 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB1AP62820 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB1AP62820 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB1AP62820 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RAB1AP62820 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.74■□□□□ 0.59
RAB1AP62820 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB1AP62820 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB1AP62820 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB1AP62820 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RAB1AP62820 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB1AP62820 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.74■□□□□ 0.59
RAB1AP62820 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB1AP62820 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.74■□□□□ 0.59
RAB1AP62820 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB1AP62820 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RAB1AP62820 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.74■□□□□ 0.59
RAB1AP62820 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB1AP62820 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB1AP62820 AC027612.3-201ENST00000413684 1047 ntBASIC18.74■□□□□ 0.59
RAB1AP62820 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.74■□□□□ 0.59
RAB1AP62820 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RAB1AP62820 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB1AP62820 AC009237.3-201ENST00000393279 1427 ntBASIC18.74■□□□□ 0.59
RAB1AP62820 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.74■□□□□ 0.59
RAB1AP62820 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB1AP62820 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB1AP62820 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB1AP62820 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB1AP62820 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB1AP62820 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB1AP62820 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB1AP62820 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB1AP62820 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB1AP62820 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB1AP62820 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RAB1AP62820 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.73■□□□□ 0.59
RAB1AP62820 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB1AP62820 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB1AP62820 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RAB1AP62820 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RAB1AP62820 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB1AP62820 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms