Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 KRT18P24-201ENST00000344739 1156 ntBASIC16.86■□□□□ 0.29
CDC34P49427 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.86■□□□□ 0.29
CDC34P49427 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CDC34P49427 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.86■□□□□ 0.29
CDC34P49427 DUX4L4-201ENST00000566884 1269 ntBASIC16.86■□□□□ 0.29
CDC34P49427 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CDC34P49427 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDC34P49427 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.86■□□□□ 0.29
CDC34P49427 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
CDC34P49427 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDC34P49427 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDC34P49427 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CDC34P49427 AC004687.1-201ENST00000579003 1625 ntBASIC16.85■□□□□ 0.29
CDC34P49427 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDC34P49427 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC34P49427 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.85■□□□□ 0.29
CDC34P49427 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC16.85■□□□□ 0.29
CDC34P49427 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.85■□□□□ 0.29
CDC34P49427 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.85■□□□□ 0.29
CDC34P49427 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC34P49427 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDC34P49427 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC34P49427 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDC34P49427 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC34P49427 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.85■□□□□ 0.29
CDC34P49427 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC34P49427 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC34P49427 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC34P49427 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.84■□□□□ 0.29
CDC34P49427 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.84■□□□□ 0.29
CDC34P49427 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC34P49427 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC34P49427 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CDC34P49427 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC34P49427 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.84■□□□□ 0.29
CDC34P49427 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.84■□□□□ 0.29
CDC34P49427 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CDC34P49427 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
CDC34P49427 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDC34P49427 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDC34P49427 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC34P49427 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC34P49427 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDC34P49427 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CDC34P49427 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC34P49427 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDC34P49427 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC34P49427 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.83■□□□□ 0.28
CDC34P49427 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDC34P49427 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC34P49427 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC34P49427 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.83■□□□□ 0.28
CDC34P49427 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC34P49427 AC104564.3-201ENST00000582367 638 ntBASIC16.83■□□□□ 0.28
CDC34P49427 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC34P49427 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
CDC34P49427 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC34P49427 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC34P49427 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC34P49427 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDC34P49427 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDC34P49427 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC34P49427 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC34P49427 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC34P49427 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.82■□□□□ 0.28
CDC34P49427 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.82■□□□□ 0.28
CDC34P49427 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC34P49427 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC34P49427 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.82■□□□□ 0.28
CDC34P49427 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC34P49427 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.82■□□□□ 0.28
CDC34P49427 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC34P49427 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC34P49427 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.82■□□□□ 0.28
CDC34P49427 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC34P49427 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDC34P49427 MIR4449-201ENST00000578365 66 ntBASIC16.82■□□□□ 0.28
CDC34P49427 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.82■□□□□ 0.28
CDC34P49427 SNX5-217ENST00000606557 1087 ntBASIC16.82■□□□□ 0.28
CDC34P49427 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDC34P49427 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC34P49427 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC34P49427 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
CDC34P49427 OXCT2P1-201ENST00000447263 1535 ntBASIC16.81■□□□□ 0.28
CDC34P49427 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.81■□□□□ 0.28
CDC34P49427 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.81■□□□□ 0.28
CDC34P49427 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC34P49427 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.81■□□□□ 0.28
CDC34P49427 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CDC34P49427 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC34P49427 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC34P49427 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.81■□□□□ 0.28
CDC34P49427 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.81■□□□□ 0.28
CDC34P49427 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDC34P49427 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.81■□□□□ 0.28
CDC34P49427 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC34P49427 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC34P49427 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
CDC34P49427 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC34P49427 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms