Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.86■■□□□ 1.09
SLC6A11P48066 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.86■■□□□ 1.09
SLC6A11P48066 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC6A11P48066 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC6A11P48066 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC6A11P48066 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC6A11P48066 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
SLC6A11P48066 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
SLC6A11P48066 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A11P48066 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.85■■□□□ 1.09
SLC6A11P48066 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
SLC6A11P48066 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A11P48066 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A11P48066 CNN2P6-201ENST00000439038 900 ntBASIC21.85■■□□□ 1.09
SLC6A11P48066 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.85■■□□□ 1.09
SLC6A11P48066 EEF1DP3-203ENST00000566025 782 ntBASIC21.85■■□□□ 1.09
SLC6A11P48066 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.85■■□□□ 1.09
SLC6A11P48066 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
SLC6A11P48066 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.85■■□□□ 1.09
SLC6A11P48066 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A11P48066 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SLC6A11P48066 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A11P48066 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A11P48066 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A11P48066 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A11P48066 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A11P48066 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A11P48066 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.84■■□□□ 1.09
SLC6A11P48066 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A11P48066 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.84■■□□□ 1.09
SLC6A11P48066 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.84■■□□□ 1.09
SLC6A11P48066 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A11P48066 SLC7A5P2-201ENST00000553010 536 ntBASIC21.84■■□□□ 1.09
SLC6A11P48066 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.84■■□□□ 1.09
SLC6A11P48066 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.84■■□□□ 1.09
SLC6A11P48066 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A11P48066 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.84■■□□□ 1.09
SLC6A11P48066 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC6A11P48066 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.84■■□□□ 1.09
SLC6A11P48066 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
SLC6A11P48066 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SLC6A11P48066 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SLC6A11P48066 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SLC6A11P48066 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SLC6A11P48066 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.83■■□□□ 1.09
SLC6A11P48066 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SLC6A11P48066 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SLC6A11P48066 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.83■■□□□ 1.09
SLC6A11P48066 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SLC6A11P48066 TSPY6P-201ENST00000448518 926 ntBASIC21.83■■□□□ 1.09
SLC6A11P48066 KRT18P20-201ENST00000548986 1279 ntBASIC21.83■■□□□ 1.09
SLC6A11P48066 AC010536.3-201ENST00000620306 533 ntBASIC21.83■■□□□ 1.09
SLC6A11P48066 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SLC6A11P48066 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A11P48066 GUSBP6-202ENST00000438529 1198 ntBASIC21.82■■□□□ 1.08
SLC6A11P48066 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A11P48066 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A11P48066 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.82■■□□□ 1.08
SLC6A11P48066 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A11P48066 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A11P48066 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A11P48066 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A11P48066 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SLC6A11P48066 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SLC6A11P48066 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.82■■□□□ 1.08
SLC6A11P48066 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A11P48066 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.82■■□□□ 1.08
SLC6A11P48066 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC6A11P48066 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC6A11P48066 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC6A11P48066 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC6A11P48066 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC6A11P48066 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SLC6A11P48066 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC6A11P48066 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
SLC6A11P48066 AC053503.5-201ENST00000601508 636 ntBASIC21.81■■□□□ 1.08
SLC6A11P48066 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
SLC6A11P48066 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC6A11P48066 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SLC6A11P48066 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC6A11P48066 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SLC6A11P48066 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
SLC6A11P48066 AC139530.1-201ENST00000575312 1977 ntBASIC21.81■■□□□ 1.08
SLC6A11P48066 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC6A11P48066 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.8■■□□□ 1.08
SLC6A11P48066 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SLC6A11P48066 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A11P48066 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A11P48066 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A11P48066 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A11P48066 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A11P48066 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC6A11P48066 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.8■■□□□ 1.08
SLC6A11P48066 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC6A11P48066 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SLC6A11P48066 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC6A11P48066 AL138781.1-201ENST00000566567 1274 ntBASIC21.8■■□□□ 1.08
SLC6A11P48066 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC6A11P48066 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A11P48066 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms