Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTR3AP46098 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTR3AP46098 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HTR3AP46098 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.69■□□□□ 0.74
HTR3AP46098 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HTR3AP46098 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTR3AP46098 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.69■□□□□ 0.74
HTR3AP46098 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HTR3AP46098 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HTR3AP46098 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.69■□□□□ 0.74
HTR3AP46098 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
HTR3AP46098 AC133561.4-201ENST00000566112 224 ntBASIC19.69■□□□□ 0.74
HTR3AP46098 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HTR3AP46098 AL139246.5-201ENST00000606645 996 ntBASIC19.69■□□□□ 0.74
HTR3AP46098 AL355001.2-201ENST00000620617 1191 ntBASIC19.69■□□□□ 0.74
HTR3AP46098 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.69■□□□□ 0.74
HTR3AP46098 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTR3AP46098 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTR3AP46098 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HTR3AP46098 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTR3AP46098 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HTR3AP46098 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTR3AP46098 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTR3AP46098 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTR3AP46098 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.68■□□□□ 0.74
HTR3AP46098 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HTR3AP46098 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HTR3AP46098 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HTR3AP46098 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HTR3AP46098 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTR3AP46098 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTR3AP46098 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.68■□□□□ 0.74
HTR3AP46098 AC027682.1-201ENST00000562846 899 ntBASIC19.68■□□□□ 0.74
HTR3AP46098 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
HTR3AP46098 AC126544.1-201ENST00000580842 1059 ntBASIC19.68■□□□□ 0.74
HTR3AP46098 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTR3AP46098 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HTR3AP46098 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HTR3AP46098 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR3AP46098 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.67■□□□□ 0.74
HTR3AP46098 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR3AP46098 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR3AP46098 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HTR3AP46098 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR3AP46098 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.67■□□□□ 0.74
HTR3AP46098 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.67■□□□□ 0.74
HTR3AP46098 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HTR3AP46098 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.67■□□□□ 0.74
HTR3AP46098 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.67■□□□□ 0.74
HTR3AP46098 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.67■□□□□ 0.74
HTR3AP46098 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HTR3AP46098 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR3AP46098 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
HTR3AP46098 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HTR3AP46098 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR3AP46098 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR3AP46098 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR3AP46098 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR3AP46098 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HTR3AP46098 OR7E47P-201ENST00000546390 1422 ntBASIC19.67■□□□□ 0.74
HTR3AP46098 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR3AP46098 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR3AP46098 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HTR3AP46098 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTR3AP46098 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTR3AP46098 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
HTR3AP46098 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
HTR3AP46098 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HTR3AP46098 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
HTR3AP46098 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTR3AP46098 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HTR3AP46098 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.66■□□□□ 0.74
HTR3AP46098 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.66■□□□□ 0.74
HTR3AP46098 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTR3AP46098 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HTR3AP46098 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTR3AP46098 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTR3AP46098 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HTR3AP46098 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HTR3AP46098 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HTR3AP46098 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.65■□□□□ 0.74
HTR3AP46098 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HTR3AP46098 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.65■□□□□ 0.74
HTR3AP46098 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTR3AP46098 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTR3AP46098 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
HTR3AP46098 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.65■□□□□ 0.74
HTR3AP46098 AC008764.7-201ENST00000593779 1081 ntBASIC19.65■□□□□ 0.74
HTR3AP46098 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTR3AP46098 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTR3AP46098 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.65■□□□□ 0.74
HTR3AP46098 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTR3AP46098 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.65■□□□□ 0.74
HTR3AP46098 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTR3AP46098 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
HTR3AP46098 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.64■□□□□ 0.74
HTR3AP46098 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
HTR3AP46098 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTR3AP46098 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTR3AP46098 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms