Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 MIR6722-201ENST00000617286 78 ntBASIC18.72■□□□□ 0.59
RAB3BP20337 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3BP20337 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3BP20337 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB3BP20337 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3BP20337 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.71■□□□□ 0.59
RAB3BP20337 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RAB3BP20337 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3BP20337 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB3BP20337 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3BP20337 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.71■□□□□ 0.59
RAB3BP20337 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3BP20337 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3BP20337 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3BP20337 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3BP20337 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB3BP20337 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3BP20337 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.7■□□□□ 0.58
RAB3BP20337 AC026471.6-201ENST00000622954 1905 ntBASIC18.7■□□□□ 0.58
RAB3BP20337 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3BP20337 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3BP20337 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3BP20337 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3BP20337 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3BP20337 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3BP20337 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
RAB3BP20337 AC010980.1-201ENST00000587192 1142 ntBASIC18.7■□□□□ 0.58
RAB3BP20337 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3BP20337 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.7■□□□□ 0.58
RAB3BP20337 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3BP20337 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.7■□□□□ 0.58
RAB3BP20337 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3BP20337 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.7■□□□□ 0.58
RAB3BP20337 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.7■□□□□ 0.58
RAB3BP20337 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB3BP20337 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3BP20337 OXCT2P1-201ENST00000447263 1535 ntBASIC18.69■□□□□ 0.58
RAB3BP20337 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB3BP20337 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3BP20337 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3BP20337 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.69■□□□□ 0.58
RAB3BP20337 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3BP20337 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3BP20337 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3BP20337 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3BP20337 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3BP20337 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3BP20337 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB3BP20337 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.68■□□□□ 0.58
RAB3BP20337 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.68■□□□□ 0.58
RAB3BP20337 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB3BP20337 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3BP20337 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
RAB3BP20337 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3BP20337 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3BP20337 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3BP20337 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3BP20337 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3BP20337 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3BP20337 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3BP20337 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB3BP20337 FEM1AP1-201ENST00000431297 1995 ntBASIC18.68■□□□□ 0.58
RAB3BP20337 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RAB3BP20337 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3BP20337 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB3BP20337 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3BP20337 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
RAB3BP20337 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB3BP20337 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB3BP20337 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB3BP20337 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3BP20337 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3BP20337 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3BP20337 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3BP20337 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3BP20337 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3BP20337 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3BP20337 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3BP20337 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3BP20337 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB3BP20337 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB3BP20337 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RAB3BP20337 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
RAB3BP20337 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RAB3BP20337 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB3BP20337 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3BP20337 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RAB3BP20337 MIR4508-201ENST00000584178 70 ntBASIC18.66■□□□□ 0.58
RAB3BP20337 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3BP20337 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3BP20337 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RAB3BP20337 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3BP20337 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RAB3BP20337 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB3BP20337 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
RAB3BP20337 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3BP20337 C17orf82-201ENST00000623772 1530 ntBASIC18.65■□□□□ 0.58
RAB3BP20337 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB3BP20337 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB3BP20337 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms