Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
COL11A2P13942 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC26.59■■□□□ 1.85
COL11A2P13942 ARL16-209ENST00000573715 763 ntTSL 3 BASIC26.59■■□□□ 1.85
COL11A2P13942 ARL16-211ENST00000576135 694 ntTSL 3 BASIC26.59■■□□□ 1.85
COL11A2P13942 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC26.59■■□□□ 1.85
COL11A2P13942 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC26.59■■□□□ 1.85
COL11A2P13942 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC26.59■■□□□ 1.85
COL11A2P13942 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
COL11A2P13942 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC26.58■■□□□ 1.85
COL11A2P13942 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC26.58■■□□□ 1.85
COL11A2P13942 FGF8-207ENST00000618991 856 ntTSL 3 BASIC26.58■■□□□ 1.85
COL11A2P13942 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL11A2P13942 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL11A2P13942 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
COL11A2P13942 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
COL11A2P13942 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
COL11A2P13942 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
COL11A2P13942 ISCU-212ENST00000547005 795 ntTSL 3 BASIC26.57■■□□□ 1.84
COL11A2P13942 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC26.57■■□□□ 1.84
COL11A2P13942 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC26.57■■□□□ 1.84
COL11A2P13942 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL11A2P13942 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL11A2P13942 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL11A2P13942 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC26.56■■□□□ 1.84
COL11A2P13942 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC26.56■■□□□ 1.84
COL11A2P13942 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC26.56■■□□□ 1.84
COL11A2P13942 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL11A2P13942 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL11A2P13942 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC26.56■■□□□ 1.84
COL11A2P13942 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC26.56■■□□□ 1.84
COL11A2P13942 AC091874.3-201ENST00000512672 1195 ntBASIC26.56■■□□□ 1.84
COL11A2P13942 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC26.56■■□□□ 1.84
COL11A2P13942 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
COL11A2P13942 AC069236.1-201ENST00000604339 616 ntBASIC26.56■■□□□ 1.84
COL11A2P13942 AC092068.2-201ENST00000590491 1708 ntBASIC26.56■■□□□ 1.84
COL11A2P13942 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
COL11A2P13942 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL11A2P13942 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
COL11A2P13942 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
COL11A2P13942 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC26.55■■□□□ 1.84
COL11A2P13942 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC26.55■■□□□ 1.84
COL11A2P13942 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL11A2P13942 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL11A2P13942 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL11A2P13942 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL11A2P13942 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC26.55■■□□□ 1.84
COL11A2P13942 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL11A2P13942 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL11A2P13942 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL11A2P13942 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL11A2P13942 LINC00526-201ENST00000581067 1875 ntBASIC26.54■■□□□ 1.84
COL11A2P13942 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL11A2P13942 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.54■■□□□ 1.84
COL11A2P13942 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL11A2P13942 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC26.54■■□□□ 1.84
COL11A2P13942 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC26.54■■□□□ 1.84
COL11A2P13942 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC26.54■■□□□ 1.84
COL11A2P13942 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
COL11A2P13942 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC26.53■■□□□ 1.84
COL11A2P13942 AL512625.2-201ENST00000417533 625 ntBASIC26.53■■□□□ 1.84
COL11A2P13942 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC26.53■■□□□ 1.84
COL11A2P13942 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC26.53■■□□□ 1.84
COL11A2P13942 INO80E-214ENST00000620599 515 ntTSL 2 BASIC26.53■■□□□ 1.84
COL11A2P13942 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC26.53■■□□□ 1.84
COL11A2P13942 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
COL11A2P13942 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL11A2P13942 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
COL11A2P13942 IRX5-204ENST00000560154 879 ntTSL 5 BASIC26.53■■□□□ 1.84
COL11A2P13942 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
COL11A2P13942 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
COL11A2P13942 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC26.52■■□□□ 1.84
COL11A2P13942 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC26.52■■□□□ 1.84
COL11A2P13942 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC26.52■■□□□ 1.84
COL11A2P13942 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
COL11A2P13942 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC26.52■■□□□ 1.84
COL11A2P13942 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
COL11A2P13942 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC26.52■■□□□ 1.84
COL11A2P13942 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
COL11A2P13942 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC26.52■■□□□ 1.84
COL11A2P13942 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
COL11A2P13942 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC26.52■■□□□ 1.84
COL11A2P13942 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC26.52■■□□□ 1.84
COL11A2P13942 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL11A2P13942 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC26.51■■□□□ 1.83
COL11A2P13942 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC26.51■■□□□ 1.83
COL11A2P13942 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC26.51■■□□□ 1.83
COL11A2P13942 AC053503.5-201ENST00000601508 636 ntBASIC26.51■■□□□ 1.83
COL11A2P13942 AC006058.3-201ENST00000606217 1069 ntBASIC26.51■■□□□ 1.83
COL11A2P13942 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
COL11A2P13942 OR7E47P-201ENST00000546390 1422 ntBASIC26.51■■□□□ 1.83
COL11A2P13942 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL11A2P13942 AL596275.1-201ENST00000423464 877 ntBASIC26.51■■□□□ 1.83
COL11A2P13942 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC26.51■■□□□ 1.83
COL11A2P13942 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
COL11A2P13942 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
COL11A2P13942 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.5■■□□□ 1.83
COL11A2P13942 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
COL11A2P13942 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL11A2P13942 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC26.5■■□□□ 1.83
COL11A2P13942 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC26.5■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms