Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GAPDHP04406 AC087742.1-201ENST00000575880 1738 ntBASIC17.85■□□□□ 0.45
GAPDHP04406 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GAPDHP04406 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.85■□□□□ 0.45
GAPDHP04406 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GAPDHP04406 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GAPDHP04406 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
GAPDHP04406 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GAPDHP04406 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GAPDHP04406 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GAPDHP04406 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
GAPDHP04406 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GAPDHP04406 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GAPDHP04406 SERBP1P1-201ENST00000396021 1160 ntBASIC17.84■□□□□ 0.45
GAPDHP04406 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.84■□□□□ 0.45
GAPDHP04406 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.84■□□□□ 0.45
GAPDHP04406 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GAPDHP04406 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
GAPDHP04406 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
GAPDHP04406 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
GAPDHP04406 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GAPDHP04406 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
GAPDHP04406 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
GAPDHP04406 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.83■□□□□ 0.45
GAPDHP04406 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
GAPDHP04406 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
GAPDHP04406 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
GAPDHP04406 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
GAPDHP04406 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.83■□□□□ 0.44
GAPDHP04406 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
GAPDHP04406 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.83■□□□□ 0.44
GAPDHP04406 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.83■□□□□ 0.44
GAPDHP04406 AC011298.3-201ENST00000615796 283 ntBASIC17.83■□□□□ 0.44
GAPDHP04406 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.83■□□□□ 0.44
GAPDHP04406 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.83■□□□□ 0.44
GAPDHP04406 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.83■□□□□ 0.44
GAPDHP04406 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.83■□□□□ 0.44
GAPDHP04406 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GAPDHP04406 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
GAPDHP04406 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GAPDHP04406 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.83■□□□□ 0.44
GAPDHP04406 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
GAPDHP04406 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.82■□□□□ 0.44
GAPDHP04406 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GAPDHP04406 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.82■□□□□ 0.44
GAPDHP04406 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GAPDHP04406 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GAPDHP04406 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GAPDHP04406 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.82■□□□□ 0.44
GAPDHP04406 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GAPDHP04406 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
GAPDHP04406 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GAPDHP04406 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GAPDHP04406 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
GAPDHP04406 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GAPDHP04406 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GAPDHP04406 AC244015.2-201ENST00000616358 1861 ntBASIC17.82■□□□□ 0.44
GAPDHP04406 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.81■□□□□ 0.44
GAPDHP04406 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GAPDHP04406 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GAPDHP04406 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.81■□□□□ 0.44
GAPDHP04406 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GAPDHP04406 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GAPDHP04406 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.81■□□□□ 0.44
GAPDHP04406 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.81■□□□□ 0.44
GAPDHP04406 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GAPDHP04406 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GAPDHP04406 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
GAPDHP04406 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GAPDHP04406 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GAPDHP04406 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.81■□□□□ 0.44
GAPDHP04406 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GAPDHP04406 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GAPDHP04406 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GAPDHP04406 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GAPDHP04406 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GAPDHP04406 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GAPDHP04406 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GAPDHP04406 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.8■□□□□ 0.44
GAPDHP04406 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GAPDHP04406 UNC93B3-201ENST00000308076 687 ntBASIC17.8■□□□□ 0.44
GAPDHP04406 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GAPDHP04406 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GAPDHP04406 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.8■□□□□ 0.44
GAPDHP04406 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
GAPDHP04406 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GAPDHP04406 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
GAPDHP04406 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.8■□□□□ 0.44
GAPDHP04406 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GAPDHP04406 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GAPDHP04406 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.8■□□□□ 0.44
GAPDHP04406 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
GAPDHP04406 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GAPDHP04406 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
GAPDHP04406 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GAPDHP04406 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
GAPDHP04406 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
GAPDHP04406 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.8■□□□□ 0.44
GAPDHP04406 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.8■□□□□ 0.44
GAPDHP04406 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms