Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MT-ND3P03897 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MT-ND3P03897 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MT-ND3P03897 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.72■■□□□ 1.07
MT-ND3P03897 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MT-ND3P03897 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.72■■□□□ 1.07
MT-ND3P03897 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.72■■□□□ 1.07
MT-ND3P03897 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MT-ND3P03897 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MT-ND3P03897 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
MT-ND3P03897 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.72■■□□□ 1.07
MT-ND3P03897 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.72■■□□□ 1.07
MT-ND3P03897 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MT-ND3P03897 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
MT-ND3P03897 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MT-ND3P03897 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MT-ND3P03897 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
MT-ND3P03897 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MT-ND3P03897 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.71■■□□□ 1.07
MT-ND3P03897 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.71■■□□□ 1.07
MT-ND3P03897 EDA-201ENST00000338901 1233 ntBASIC21.71■■□□□ 1.07
MT-ND3P03897 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.71■■□□□ 1.07
MT-ND3P03897 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
MT-ND3P03897 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.71■■□□□ 1.07
MT-ND3P03897 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
MT-ND3P03897 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MT-ND3P03897 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MT-ND3P03897 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MT-ND3P03897 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.7■■□□□ 1.06
MT-ND3P03897 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MT-ND3P03897 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.7■■□□□ 1.06
MT-ND3P03897 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.7■■□□□ 1.06
MT-ND3P03897 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MT-ND3P03897 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MT-ND3P03897 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.7■■□□□ 1.06
MT-ND3P03897 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MT-ND3P03897 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MT-ND3P03897 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
MT-ND3P03897 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.7■■□□□ 1.06
MT-ND3P03897 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
MT-ND3P03897 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MT-ND3P03897 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
MT-ND3P03897 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.69■■□□□ 1.06
MT-ND3P03897 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.69■■□□□ 1.06
MT-ND3P03897 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.69■■□□□ 1.06
MT-ND3P03897 AL355001.2-201ENST00000620617 1191 ntBASIC21.69■■□□□ 1.06
MT-ND3P03897 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
MT-ND3P03897 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MT-ND3P03897 Z98882.1-201ENST00000622160 2253 ntBASIC21.69■■□□□ 1.06
MT-ND3P03897 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.69■■□□□ 1.06
MT-ND3P03897 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
MT-ND3P03897 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
MT-ND3P03897 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MT-ND3P03897 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MT-ND3P03897 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
MT-ND3P03897 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MT-ND3P03897 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
MT-ND3P03897 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MT-ND3P03897 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MT-ND3P03897 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MT-ND3P03897 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MT-ND3P03897 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
MT-ND3P03897 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
MT-ND3P03897 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MT-ND3P03897 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.68■■□□□ 1.06
MT-ND3P03897 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.68■■□□□ 1.06
MT-ND3P03897 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
MT-ND3P03897 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.67■■□□□ 1.06
MT-ND3P03897 SLC25A24-204ENST00000569674 2357 ntBASIC21.67■■□□□ 1.06
MT-ND3P03897 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.67■■□□□ 1.06
MT-ND3P03897 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MT-ND3P03897 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MT-ND3P03897 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MT-ND3P03897 AC024257.2-201ENST00000549699 147 ntBASIC21.67■■□□□ 1.06
MT-ND3P03897 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.67■■□□□ 1.06
MT-ND3P03897 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MT-ND3P03897 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.67■■□□□ 1.06
MT-ND3P03897 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MT-ND3P03897 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MT-ND3P03897 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
MT-ND3P03897 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.66■■□□□ 1.06
MT-ND3P03897 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.66■■□□□ 1.06
MT-ND3P03897 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
MT-ND3P03897 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
MT-ND3P03897 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
MT-ND3P03897 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
MT-ND3P03897 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MT-ND3P03897 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MT-ND3P03897 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
MT-ND3P03897 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
MT-ND3P03897 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MT-ND3P03897 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MT-ND3P03897 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
MT-ND3P03897 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
MT-ND3P03897 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MT-ND3P03897 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.65■■□□□ 1.06
MT-ND3P03897 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.65■■□□□ 1.06
MT-ND3P03897 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.65■■□□□ 1.06
MT-ND3P03897 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MT-ND3P03897 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms