Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24.1■■□□□ 1.45
GGPS1O95749 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.1■■□□□ 1.45
GGPS1O95749 AC006970.2-201ENST00000450065 779 ntBASIC24.1■■□□□ 1.45
GGPS1O95749 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.1■■□□□ 1.45
GGPS1O95749 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.1■■□□□ 1.45
GGPS1O95749 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
GGPS1O95749 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC24.1■■□□□ 1.45
GGPS1O95749 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
GGPS1O95749 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
GGPS1O95749 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.1■■□□□ 1.45
GGPS1O95749 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
GGPS1O95749 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
GGPS1O95749 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
GGPS1O95749 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
GGPS1O95749 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC24.1■■□□□ 1.45
GGPS1O95749 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
GGPS1O95749 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
GGPS1O95749 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.09■■□□□ 1.45
GGPS1O95749 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
GGPS1O95749 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC24.09■■□□□ 1.45
GGPS1O95749 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
GGPS1O95749 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
GGPS1O95749 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
GGPS1O95749 AP006587.3-201ENST00000525742 1516 ntBASIC24.09■■□□□ 1.45
GGPS1O95749 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC24.09■■□□□ 1.45
GGPS1O95749 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC24.09■■□□□ 1.45
GGPS1O95749 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24.09■■□□□ 1.45
GGPS1O95749 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
GGPS1O95749 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
GGPS1O95749 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
GGPS1O95749 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
GGPS1O95749 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC24.08■■□□□ 1.45
GGPS1O95749 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.08■■□□□ 1.45
GGPS1O95749 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
GGPS1O95749 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
GGPS1O95749 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.08■■□□□ 1.45
GGPS1O95749 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.08■■□□□ 1.45
GGPS1O95749 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.08■■□□□ 1.45
GGPS1O95749 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.08■■□□□ 1.45
GGPS1O95749 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
GGPS1O95749 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
GGPS1O95749 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.07■■□□□ 1.44
GGPS1O95749 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
GGPS1O95749 MIR663A-201ENST00000385250 93 ntBASIC24.07■■□□□ 1.44
GGPS1O95749 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
GGPS1O95749 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.07■■□□□ 1.44
GGPS1O95749 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
GGPS1O95749 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
GGPS1O95749 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
GGPS1O95749 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
GGPS1O95749 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
GGPS1O95749 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
GGPS1O95749 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
GGPS1O95749 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
GGPS1O95749 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.06■■□□□ 1.44
GGPS1O95749 AC010141.2-201ENST00000452426 721 ntBASIC24.06■■□□□ 1.44
GGPS1O95749 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24.06■■□□□ 1.44
GGPS1O95749 AC138907.5-202ENST00000569484 235 ntBASIC24.06■■□□□ 1.44
GGPS1O95749 MYCNOS-205ENST00000641950 531 ntBASIC24.06■■□□□ 1.44
GGPS1O95749 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
GGPS1O95749 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
GGPS1O95749 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
GGPS1O95749 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
GGPS1O95749 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC24.05■■□□□ 1.44
GGPS1O95749 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC24.05■■□□□ 1.44
GGPS1O95749 AC139530.1-201ENST00000575312 1977 ntBASIC24.05■■□□□ 1.44
GGPS1O95749 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
GGPS1O95749 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC24.05■■□□□ 1.44
GGPS1O95749 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
GGPS1O95749 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
GGPS1O95749 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
GGPS1O95749 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
GGPS1O95749 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC24.04■■□□□ 1.44
GGPS1O95749 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
GGPS1O95749 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
GGPS1O95749 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
GGPS1O95749 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
GGPS1O95749 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
GGPS1O95749 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
GGPS1O95749 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC24.04■■□□□ 1.44
GGPS1O95749 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.04■■□□□ 1.44
GGPS1O95749 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.04■■□□□ 1.44
GGPS1O95749 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.04■■□□□ 1.44
GGPS1O95749 DUX4L16-201ENST00000555130 1264 ntBASIC24.04■■□□□ 1.44
GGPS1O95749 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.04■■□□□ 1.44
GGPS1O95749 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.04■■□□□ 1.44
GGPS1O95749 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
GGPS1O95749 AC104771.1-201ENST00000603335 964 ntBASIC24.04■■□□□ 1.44
GGPS1O95749 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.04■■□□□ 1.44
GGPS1O95749 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.04■■□□□ 1.44
GGPS1O95749 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
GGPS1O95749 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC24.04■■□□□ 1.44
GGPS1O95749 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
GGPS1O95749 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
GGPS1O95749 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
GGPS1O95749 AC079834.2-201ENST00000609776 1949 ntBASIC24.04■■□□□ 1.44
GGPS1O95749 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC24.04■■□□□ 1.44
GGPS1O95749 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
GGPS1O95749 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC24.03■■□□□ 1.44
GGPS1O95749 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.03■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms