Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
RAPGEF3O95398 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
RAPGEF3O95398 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
RAPGEF3O95398 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
RAPGEF3O95398 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC32.61■■■□□ 2.81
RAPGEF3O95398 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC32.61■■■□□ 2.81
RAPGEF3O95398 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
RAPGEF3O95398 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC32.61■■■□□ 2.81
RAPGEF3O95398 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
RAPGEF3O95398 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
RAPGEF3O95398 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
RAPGEF3O95398 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
RAPGEF3O95398 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
RAPGEF3O95398 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC32.6■■■□□ 2.81
RAPGEF3O95398 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC32.6■■■□□ 2.81
RAPGEF3O95398 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC32.6■■■□□ 2.81
RAPGEF3O95398 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
RAPGEF3O95398 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC32.6■■■□□ 2.81
RAPGEF3O95398 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC32.6■■■□□ 2.81
RAPGEF3O95398 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
RAPGEF3O95398 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC32.6■■■□□ 2.81
RAPGEF3O95398 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
RAPGEF3O95398 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
RAPGEF3O95398 FXN-202ENST00000396364 980 ntTSL 5 BASIC32.59■■■□□ 2.81
RAPGEF3O95398 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC32.59■■■□□ 2.81
RAPGEF3O95398 H19-210ENST00000439725 1929 ntTSL 2 BASIC32.59■■■□□ 2.81
RAPGEF3O95398 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC32.58■■■□□ 2.81
RAPGEF3O95398 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
RAPGEF3O95398 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC32.58■■■□□ 2.81
RAPGEF3O95398 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC32.58■■■□□ 2.81
RAPGEF3O95398 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC32.58■■■□□ 2.81
RAPGEF3O95398 AC008403.3-201ENST00000598924 454 ntBASIC32.58■■■□□ 2.81
RAPGEF3O95398 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
RAPGEF3O95398 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
RAPGEF3O95398 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
RAPGEF3O95398 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.81
RAPGEF3O95398 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
RAPGEF3O95398 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
RAPGEF3O95398 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC32.57■■■□□ 2.8
RAPGEF3O95398 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC32.57■■■□□ 2.8
RAPGEF3O95398 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC32.57■■■□□ 2.8
RAPGEF3O95398 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
RAPGEF3O95398 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC32.57■■■□□ 2.8
RAPGEF3O95398 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC32.57■■■□□ 2.8
RAPGEF3O95398 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
RAPGEF3O95398 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
RAPGEF3O95398 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
RAPGEF3O95398 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC32.56■■■□□ 2.8
RAPGEF3O95398 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC32.56■■■□□ 2.8
RAPGEF3O95398 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC32.56■■■□□ 2.8
RAPGEF3O95398 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
RAPGEF3O95398 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
RAPGEF3O95398 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
RAPGEF3O95398 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC32.55■■■□□ 2.8
RAPGEF3O95398 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
RAPGEF3O95398 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC32.55■■■□□ 2.8
RAPGEF3O95398 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC32.55■■■□□ 2.8
RAPGEF3O95398 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC32.55■■■□□ 2.8
RAPGEF3O95398 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
RAPGEF3O95398 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
RAPGEF3O95398 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC32.54■■■□□ 2.8
RAPGEF3O95398 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC32.54■■■□□ 2.8
RAPGEF3O95398 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
RAPGEF3O95398 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC32.54■■■□□ 2.8
RAPGEF3O95398 REXO1L12P-201ENST00000622156 912 ntBASIC32.54■■■□□ 2.8
RAPGEF3O95398 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC32.54■■■□□ 2.8
RAPGEF3O95398 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
RAPGEF3O95398 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC32.53■■■□□ 2.8
RAPGEF3O95398 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC32.53■■■□□ 2.8
RAPGEF3O95398 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
RAPGEF3O95398 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
RAPGEF3O95398 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
RAPGEF3O95398 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
RAPGEF3O95398 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
RAPGEF3O95398 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC32.53■■■□□ 2.8
RAPGEF3O95398 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC32.53■■■□□ 2.8
RAPGEF3O95398 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC32.53■■■□□ 2.8
RAPGEF3O95398 Z99916.2-201ENST00000604037 246 ntBASIC32.53■■■□□ 2.8
RAPGEF3O95398 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
RAPGEF3O95398 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
RAPGEF3O95398 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC32.53■■■□□ 2.8
RAPGEF3O95398 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
RAPGEF3O95398 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC32.52■■■□□ 2.8
RAPGEF3O95398 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC32.52■■■□□ 2.8
RAPGEF3O95398 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC32.52■■■□□ 2.8
RAPGEF3O95398 AC138932.3-201ENST00000567634 1902 ntBASIC32.52■■■□□ 2.8
RAPGEF3O95398 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC32.52■■■□□ 2.8
RAPGEF3O95398 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC32.52■■■□□ 2.8
RAPGEF3O95398 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC32.52■■■□□ 2.8
RAPGEF3O95398 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
RAPGEF3O95398 AC053503.5-201ENST00000601508 636 ntBASIC32.52■■■□□ 2.8
RAPGEF3O95398 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
RAPGEF3O95398 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.8
RAPGEF3O95398 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
RAPGEF3O95398 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
RAPGEF3O95398 AP004607.7-201ENST00000527152 1677 ntBASIC32.51■■■□□ 2.79
RAPGEF3O95398 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC32.51■■■□□ 2.79
RAPGEF3O95398 MIR718-201ENST00000390190 70 ntBASIC32.51■■■□□ 2.79
RAPGEF3O95398 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC32.51■■■□□ 2.79
RAPGEF3O95398 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC32.51■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms