Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CDRT1O95170 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.03■□□□□ 0.64
CDRT1O95170 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.03■□□□□ 0.64
CDRT1O95170 AC103724.3-201ENST00000564481 992 ntBASIC19.03■□□□□ 0.64
CDRT1O95170 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDRT1O95170 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.03■□□□□ 0.64
CDRT1O95170 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CDRT1O95170 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDRT1O95170 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDRT1O95170 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDRT1O95170 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDRT1O95170 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDRT1O95170 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDRT1O95170 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDRT1O95170 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDRT1O95170 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDRT1O95170 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.02■□□□□ 0.64
CDRT1O95170 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.02■□□□□ 0.64
CDRT1O95170 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDRT1O95170 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDRT1O95170 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CDRT1O95170 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CDRT1O95170 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.02■□□□□ 0.64
CDRT1O95170 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDRT1O95170 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDRT1O95170 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
CDRT1O95170 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDRT1O95170 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDRT1O95170 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDRT1O95170 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.01■□□□□ 0.63
CDRT1O95170 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CDRT1O95170 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDRT1O95170 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CDRT1O95170 CA15P2-201ENST00000611168 834 ntBASIC19.01■□□□□ 0.63
CDRT1O95170 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDRT1O95170 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CDRT1O95170 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDRT1O95170 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.01■□□□□ 0.63
CDRT1O95170 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDRT1O95170 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDRT1O95170 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CDRT1O95170 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDRT1O95170 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDRT1O95170 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDRT1O95170 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDRT1O95170 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19■□□□□ 0.63
CDRT1O95170 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CDRT1O95170 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19■□□□□ 0.63
CDRT1O95170 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19■□□□□ 0.63
CDRT1O95170 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDRT1O95170 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDRT1O95170 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19■□□□□ 0.63
CDRT1O95170 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CDRT1O95170 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CDRT1O95170 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19■□□□□ 0.63
CDRT1O95170 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDRT1O95170 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDRT1O95170 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDRT1O95170 FEM1AP1-201ENST00000431297 1995 ntBASIC18.99■□□□□ 0.63
CDRT1O95170 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CDRT1O95170 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDRT1O95170 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.99■□□□□ 0.63
CDRT1O95170 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.99■□□□□ 0.63
CDRT1O95170 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.99■□□□□ 0.63
CDRT1O95170 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.99■□□□□ 0.63
CDRT1O95170 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.99■□□□□ 0.63
CDRT1O95170 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CDRT1O95170 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.99■□□□□ 0.63
CDRT1O95170 AC009086.3-201ENST00000623486 1008 ntBASIC18.99■□□□□ 0.63
CDRT1O95170 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.99■□□□□ 0.63
CDRT1O95170 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDRT1O95170 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDRT1O95170 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.99■□□□□ 0.63
CDRT1O95170 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDRT1O95170 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
CDRT1O95170 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
CDRT1O95170 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDRT1O95170 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDRT1O95170 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.98■□□□□ 0.63
CDRT1O95170 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CDRT1O95170 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDRT1O95170 FP325331.1-202ENST00000623531 1380 ntBASIC18.98■□□□□ 0.63
CDRT1O95170 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDRT1O95170 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.98■□□□□ 0.63
CDRT1O95170 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDRT1O95170 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDRT1O95170 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDRT1O95170 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDRT1O95170 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDRT1O95170 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDRT1O95170 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDRT1O95170 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDRT1O95170 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDRT1O95170 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.97■□□□□ 0.63
CDRT1O95170 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.97■□□□□ 0.63
CDRT1O95170 AC137630.3-201ENST00000607245 391 ntBASIC18.97■□□□□ 0.63
CDRT1O95170 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.97■□□□□ 0.63
CDRT1O95170 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDRT1O95170 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.97■□□□□ 0.63
CDRT1O95170 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms