Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RRP8O43159 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RRP8O43159 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RRP8O43159 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RRP8O43159 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RRP8O43159 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RRP8O43159 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
RRP8O43159 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RRP8O43159 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RRP8O43159 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RRP8O43159 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RRP8O43159 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RRP8O43159 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.18■□□□□ 0.82
RRP8O43159 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RRP8O43159 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RRP8O43159 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RRP8O43159 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RRP8O43159 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.18■□□□□ 0.82
RRP8O43159 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RRP8O43159 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RRP8O43159 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RRP8O43159 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RRP8O43159 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RRP8O43159 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RRP8O43159 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.17■□□□□ 0.82
RRP8O43159 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
RRP8O43159 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RRP8O43159 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RRP8O43159 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RRP8O43159 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RRP8O43159 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RRP8O43159 AC083880.1-201ENST00000608266 535 ntBASIC20.17■□□□□ 0.82
RRP8O43159 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RRP8O43159 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
RRP8O43159 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RRP8O43159 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
RRP8O43159 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.16■□□□□ 0.82
RRP8O43159 AC016405.3-201ENST00000607710 860 ntBASIC20.16■□□□□ 0.82
RRP8O43159 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RRP8O43159 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RRP8O43159 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.16■□□□□ 0.82
RRP8O43159 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RRP8O43159 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RRP8O43159 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RRP8O43159 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RRP8O43159 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.16■□□□□ 0.82
RRP8O43159 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RRP8O43159 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RRP8O43159 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
RRP8O43159 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RRP8O43159 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.15■□□□□ 0.82
RRP8O43159 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RRP8O43159 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.15■□□□□ 0.82
RRP8O43159 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RRP8O43159 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
RRP8O43159 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.15■□□□□ 0.82
RRP8O43159 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RRP8O43159 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RRP8O43159 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.15■□□□□ 0.82
RRP8O43159 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
RRP8O43159 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RRP8O43159 AC079630.1-202ENST00000618127 1840 ntBASIC20.14■□□□□ 0.81
RRP8O43159 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RRP8O43159 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.14■□□□□ 0.81
RRP8O43159 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RRP8O43159 AC093787.1-201ENST00000450396 207 ntBASIC20.14■□□□□ 0.81
RRP8O43159 AC008550.1-201ENST00000511500 884 ntBASIC20.14■□□□□ 0.81
RRP8O43159 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.14■□□□□ 0.81
RRP8O43159 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RRP8O43159 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RRP8O43159 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RRP8O43159 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RRP8O43159 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RRP8O43159 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RRP8O43159 AC055733.4-201ENST00000638462 1354 ntBASIC20.13■□□□□ 0.81
RRP8O43159 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RRP8O43159 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RRP8O43159 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RRP8O43159 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RRP8O43159 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.13■□□□□ 0.81
RRP8O43159 UBE2SP1-201ENST00000450587 669 ntBASIC20.13■□□□□ 0.81
RRP8O43159 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.13■□□□□ 0.81
RRP8O43159 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.13■□□□□ 0.81
RRP8O43159 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.13■□□□□ 0.81
RRP8O43159 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.13■□□□□ 0.81
RRP8O43159 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.13■□□□□ 0.81
RRP8O43159 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.13■□□□□ 0.81
RRP8O43159 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.13■□□□□ 0.81
RRP8O43159 MYC-209ENST00000641252 345 ntBASIC20.13■□□□□ 0.81
RRP8O43159 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RRP8O43159 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RRP8O43159 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RRP8O43159 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RRP8O43159 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.12■□□□□ 0.81
RRP8O43159 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RRP8O43159 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RRP8O43159 MIR718-201ENST00000390190 70 ntBASIC20.12■□□□□ 0.81
RRP8O43159 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.12■□□□□ 0.81
RRP8O43159 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.12■□□□□ 0.81
RRP8O43159 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms