Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM49BA6NDI0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM49BA6NDI0 AL136162.1-201ENST00000607711 1078 ntBASIC23.62■■□□□ 1.37
TRIM49BA6NDI0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.62■■□□□ 1.37
TRIM49BA6NDI0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM49BA6NDI0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM49BA6NDI0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM49BA6NDI0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.62■■□□□ 1.37
TRIM49BA6NDI0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM49BA6NDI0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM49BA6NDI0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.62■■□□□ 1.37
TRIM49BA6NDI0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM49BA6NDI0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM49BA6NDI0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.61■■□□□ 1.37
TRIM49BA6NDI0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.61■■□□□ 1.37
TRIM49BA6NDI0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.61■■□□□ 1.37
TRIM49BA6NDI0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.61■■□□□ 1.37
TRIM49BA6NDI0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.61■■□□□ 1.37
TRIM49BA6NDI0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM49BA6NDI0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM49BA6NDI0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM49BA6NDI0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM49BA6NDI0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.6■■□□□ 1.37
TRIM49BA6NDI0 AP004607.7-201ENST00000527152 1677 ntBASIC23.6■■□□□ 1.37
TRIM49BA6NDI0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM49BA6NDI0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.6■■□□□ 1.37
TRIM49BA6NDI0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM49BA6NDI0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
TRIM49BA6NDI0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM49BA6NDI0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.6■■□□□ 1.37
TRIM49BA6NDI0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM49BA6NDI0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.6■■□□□ 1.37
TRIM49BA6NDI0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
TRIM49BA6NDI0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.59■■□□□ 1.37
TRIM49BA6NDI0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.59■■□□□ 1.37
TRIM49BA6NDI0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM49BA6NDI0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM49BA6NDI0 BX842568.3-201ENST00000418104 571 ntBASIC23.59■■□□□ 1.37
TRIM49BA6NDI0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.59■■□□□ 1.37
TRIM49BA6NDI0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.59■■□□□ 1.37
TRIM49BA6NDI0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM49BA6NDI0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM49BA6NDI0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.59■■□□□ 1.37
TRIM49BA6NDI0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM49BA6NDI0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.59■■□□□ 1.37
TRIM49BA6NDI0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
TRIM49BA6NDI0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM49BA6NDI0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM49BA6NDI0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM49BA6NDI0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM49BA6NDI0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
TRIM49BA6NDI0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.58■■□□□ 1.37
TRIM49BA6NDI0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM49BA6NDI0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.58■■□□□ 1.37
TRIM49BA6NDI0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TRIM49BA6NDI0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TRIM49BA6NDI0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
TRIM49BA6NDI0 AC135279.3-201ENST00000610945 1311 ntBASIC23.58■■□□□ 1.36
TRIM49BA6NDI0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
TRIM49BA6NDI0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM49BA6NDI0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.57■■□□□ 1.36
TRIM49BA6NDI0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.57■■□□□ 1.36
TRIM49BA6NDI0 FEM1AP4-201ENST00000443167 1987 ntBASIC23.57■■□□□ 1.36
TRIM49BA6NDI0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.57■■□□□ 1.36
TRIM49BA6NDI0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM49BA6NDI0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM49BA6NDI0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.57■■□□□ 1.36
TRIM49BA6NDI0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM49BA6NDI0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.56■■□□□ 1.36
TRIM49BA6NDI0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM49BA6NDI0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM49BA6NDI0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM49BA6NDI0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM49BA6NDI0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.56■■□□□ 1.36
TRIM49BA6NDI0 AC096631.2-201ENST00000436136 790 ntBASIC23.56■■□□□ 1.36
TRIM49BA6NDI0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.56■■□□□ 1.36
TRIM49BA6NDI0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.56■■□□□ 1.36
TRIM49BA6NDI0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM49BA6NDI0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
TRIM49BA6NDI0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM49BA6NDI0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM49BA6NDI0 AC003102.1-202ENST00000563394 1796 ntBASIC23.55■■□□□ 1.36
TRIM49BA6NDI0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM49BA6NDI0 AC008406.3-201ENST00000620001 1374 ntBASIC23.55■■□□□ 1.36
TRIM49BA6NDI0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM49BA6NDI0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
TRIM49BA6NDI0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.55■■□□□ 1.36
TRIM49BA6NDI0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM49BA6NDI0 AC133561.4-201ENST00000566112 224 ntBASIC23.55■■□□□ 1.36
TRIM49BA6NDI0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM49BA6NDI0 AC233992.3-201ENST00000607491 485 ntBASIC23.55■■□□□ 1.36
TRIM49BA6NDI0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM49BA6NDI0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.55■■□□□ 1.36
TRIM49BA6NDI0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
TRIM49BA6NDI0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM49BA6NDI0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.55■■□□□ 1.36
TRIM49BA6NDI0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM49BA6NDI0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM49BA6NDI0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM49BA6NDI0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms