Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.71■□□□□ 0.91
CNOT1A5YKK6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT1A5YKK6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT1A5YKK6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CNOT1A5YKK6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT1A5YKK6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.7■□□□□ 0.9
CNOT1A5YKK6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.7■□□□□ 0.9
CNOT1A5YKK6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT1A5YKK6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.7■□□□□ 0.9
CNOT1A5YKK6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.7■□□□□ 0.9
CNOT1A5YKK6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT1A5YKK6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT1A5YKK6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.7■□□□□ 0.9
CNOT1A5YKK6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT1A5YKK6 KRT18P21-201ENST00000515767 1272 ntBASIC20.7■□□□□ 0.9
CNOT1A5YKK6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.7■□□□□ 0.9
CNOT1A5YKK6 AL359736.2-201ENST00000621992 437 ntBASIC20.7■□□□□ 0.9
CNOT1A5YKK6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.69■□□□□ 0.9
CNOT1A5YKK6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT1A5YKK6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT1A5YKK6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.69■□□□□ 0.9
CNOT1A5YKK6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT1A5YKK6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT1A5YKK6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT1A5YKK6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT1A5YKK6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT1A5YKK6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.69■□□□□ 0.9
CNOT1A5YKK6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.69■□□□□ 0.9
CNOT1A5YKK6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.69■□□□□ 0.9
CNOT1A5YKK6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CNOT1A5YKK6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT1A5YKK6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.69■□□□□ 0.9
CNOT1A5YKK6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.69■□□□□ 0.9
CNOT1A5YKK6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.69■□□□□ 0.9
CNOT1A5YKK6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT1A5YKK6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CNOT1A5YKK6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CNOT1A5YKK6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT1A5YKK6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.68■□□□□ 0.9
CNOT1A5YKK6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.68■□□□□ 0.9
CNOT1A5YKK6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT1A5YKK6 LINC00543-201ENST00000567234 1845 ntBASIC20.68■□□□□ 0.9
CNOT1A5YKK6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT1A5YKK6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT1A5YKK6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT1A5YKK6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT1A5YKK6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT1A5YKK6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.68■□□□□ 0.9
CNOT1A5YKK6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.68■□□□□ 0.9
CNOT1A5YKK6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT1A5YKK6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT1A5YKK6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT1A5YKK6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.67■□□□□ 0.9
CNOT1A5YKK6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT1A5YKK6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.67■□□□□ 0.9
CNOT1A5YKK6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT1A5YKK6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.67■□□□□ 0.9
CNOT1A5YKK6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.67■□□□□ 0.9
CNOT1A5YKK6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT1A5YKK6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT1A5YKK6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.67■□□□□ 0.9
CNOT1A5YKK6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.67■□□□□ 0.9
CNOT1A5YKK6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT1A5YKK6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CNOT1A5YKK6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.67■□□□□ 0.9
CNOT1A5YKK6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT1A5YKK6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.66■□□□□ 0.9
CNOT1A5YKK6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT1A5YKK6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT1A5YKK6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT1A5YKK6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CNOT1A5YKK6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.66■□□□□ 0.9
CNOT1A5YKK6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT1A5YKK6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT1A5YKK6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT1A5YKK6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT1A5YKK6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.66■□□□□ 0.9
CNOT1A5YKK6 RPPH1-201ENST00000516869 333 ntBASIC20.66■□□□□ 0.9
CNOT1A5YKK6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT1A5YKK6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.66■□□□□ 0.9
CNOT1A5YKK6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT1A5YKK6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT1A5YKK6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CNOT1A5YKK6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.65■□□□□ 0.9
CNOT1A5YKK6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CNOT1A5YKK6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT1A5YKK6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT1A5YKK6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT1A5YKK6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT1A5YKK6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT1A5YKK6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.65■□□□□ 0.9
CNOT1A5YKK6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.65■□□□□ 0.9
CNOT1A5YKK6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CNOT1A5YKK6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT1A5YKK6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT1A5YKK6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT1A5YKK6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT1A5YKK6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
CNOT1A5YKK6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.64■□□□□ 0.89
CNOT1A5YKK6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms