Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.93■■□□□ 1.58
CCDC196A0A1B0GTZ2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.93■■□□□ 1.58
CCDC196A0A1B0GTZ2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
CCDC196A0A1B0GTZ2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CCDC196A0A1B0GTZ2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC24.93■■□□□ 1.58
CCDC196A0A1B0GTZ2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CCDC196A0A1B0GTZ2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CCDC196A0A1B0GTZ2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CCDC196A0A1B0GTZ2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC24.92■■□□□ 1.58
CCDC196A0A1B0GTZ2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CCDC196A0A1B0GTZ2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
CCDC196A0A1B0GTZ2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CCDC196A0A1B0GTZ2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CCDC196A0A1B0GTZ2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC24.92■■□□□ 1.58
CCDC196A0A1B0GTZ2 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.92■■□□□ 1.58
CCDC196A0A1B0GTZ2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC24.92■■□□□ 1.58
CCDC196A0A1B0GTZ2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
CCDC196A0A1B0GTZ2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CCDC196A0A1B0GTZ2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CCDC196A0A1B0GTZ2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC24.92■■□□□ 1.58
CCDC196A0A1B0GTZ2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.92■■□□□ 1.58
CCDC196A0A1B0GTZ2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
CCDC196A0A1B0GTZ2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC24.91■■□□□ 1.58
CCDC196A0A1B0GTZ2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC24.91■■□□□ 1.58
CCDC196A0A1B0GTZ2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
CCDC196A0A1B0GTZ2 LINC00565-201ENST00000562710 2331 ntBASIC24.91■■□□□ 1.58
CCDC196A0A1B0GTZ2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCDC196A0A1B0GTZ2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CCDC196A0A1B0GTZ2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCDC196A0A1B0GTZ2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCDC196A0A1B0GTZ2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.91■■□□□ 1.58
CCDC196A0A1B0GTZ2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCDC196A0A1B0GTZ2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.91■■□□□ 1.58
CCDC196A0A1B0GTZ2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCDC196A0A1B0GTZ2 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.91■■□□□ 1.58
CCDC196A0A1B0GTZ2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC24.9■■□□□ 1.58
CCDC196A0A1B0GTZ2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CCDC196A0A1B0GTZ2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CCDC196A0A1B0GTZ2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CCDC196A0A1B0GTZ2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CCDC196A0A1B0GTZ2 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.9■■□□□ 1.58
CCDC196A0A1B0GTZ2 ZNRF2P3-201ENST00000424200 374 ntBASIC24.9■■□□□ 1.58
CCDC196A0A1B0GTZ2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC24.9■■□□□ 1.58
CCDC196A0A1B0GTZ2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.9■■□□□ 1.58
CCDC196A0A1B0GTZ2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
CCDC196A0A1B0GTZ2 AC005224.4-201ENST00000583262 1652 ntBASIC24.9■■□□□ 1.58
CCDC196A0A1B0GTZ2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CCDC196A0A1B0GTZ2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC24.9■■□□□ 1.58
CCDC196A0A1B0GTZ2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
CCDC196A0A1B0GTZ2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC24.9■■□□□ 1.58
CCDC196A0A1B0GTZ2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CCDC196A0A1B0GTZ2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
CCDC196A0A1B0GTZ2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC24.89■■□□□ 1.58
CCDC196A0A1B0GTZ2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
CCDC196A0A1B0GTZ2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CCDC196A0A1B0GTZ2 AC027612.3-201ENST00000413684 1047 ntBASIC24.89■■□□□ 1.58
CCDC196A0A1B0GTZ2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC24.89■■□□□ 1.58
CCDC196A0A1B0GTZ2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CCDC196A0A1B0GTZ2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CCDC196A0A1B0GTZ2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
CCDC196A0A1B0GTZ2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC24.89■■□□□ 1.57
CCDC196A0A1B0GTZ2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCDC196A0A1B0GTZ2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.88■■□□□ 1.57
CCDC196A0A1B0GTZ2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCDC196A0A1B0GTZ2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCDC196A0A1B0GTZ2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCDC196A0A1B0GTZ2 MIR6084-201ENST00000622012 110 ntBASIC24.88■■□□□ 1.57
CCDC196A0A1B0GTZ2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CCDC196A0A1B0GTZ2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
CCDC196A0A1B0GTZ2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC24.88■■□□□ 1.57
CCDC196A0A1B0GTZ2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCDC196A0A1B0GTZ2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCDC196A0A1B0GTZ2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC24.88■■□□□ 1.57
CCDC196A0A1B0GTZ2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CCDC196A0A1B0GTZ2 AC026471.6-201ENST00000622954 1905 ntBASIC24.87■■□□□ 1.57
CCDC196A0A1B0GTZ2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CCDC196A0A1B0GTZ2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CCDC196A0A1B0GTZ2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.87■■□□□ 1.57
CCDC196A0A1B0GTZ2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CCDC196A0A1B0GTZ2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
CCDC196A0A1B0GTZ2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CCDC196A0A1B0GTZ2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
CCDC196A0A1B0GTZ2 TPRG1LP1-201ENST00000598702 760 ntBASIC24.87■■□□□ 1.57
CCDC196A0A1B0GTZ2 AC055733.4-201ENST00000638462 1354 ntBASIC24.87■■□□□ 1.57
CCDC196A0A1B0GTZ2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.87■■□□□ 1.57
CCDC196A0A1B0GTZ2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCDC196A0A1B0GTZ2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CCDC196A0A1B0GTZ2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.86■■□□□ 1.57
CCDC196A0A1B0GTZ2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCDC196A0A1B0GTZ2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC24.86■■□□□ 1.57
CCDC196A0A1B0GTZ2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC24.86■■□□□ 1.57
CCDC196A0A1B0GTZ2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCDC196A0A1B0GTZ2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CCDC196A0A1B0GTZ2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC24.86■■□□□ 1.57
CCDC196A0A1B0GTZ2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.86■■□□□ 1.57
CCDC196A0A1B0GTZ2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCDC196A0A1B0GTZ2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCDC196A0A1B0GTZ2 AC010542.4-201ENST00000563151 1910 ntBASIC24.86■■□□□ 1.57
CCDC196A0A1B0GTZ2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
CCDC196A0A1B0GTZ2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms