Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC011471.2-201ENST00000588192 523 ntTSL 4 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 AC008897.3-201ENST00000607296 483 ntBASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 AC068134.4-201ENST00000613365 122 ntBASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 AL137785.1-201ENST00000637466 490 ntTSL 5 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 YWHAB-202ENST00000372839 3109 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 ZIK1-202ENST00000536878 4144 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 SON-202ENST00000356577 8813 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 IL1RAP-210ENST00000434491 1565 ntTSL 5 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 ADGRF3-202ENST00000333478 3896 ntTSL 5 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 BCAS1-201ENST00000371435 3020 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 AC099521.2-201ENST00000619354 2036 ntBASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 OTUD6B-AS1-202ENST00000524003 2171 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 FN1-207ENST00000421182 8103 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 AGPAT1-206ENST00000395499 2496 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 ATAT1-201ENST00000318999 2611 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 PCNA-201ENST00000379143 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 AC005906.2-210ENST00000640468 1303 ntTSL 5 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 DZIP1-201ENST00000347108 7068 ntAPPRIS P4 TSL 5 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 TAS1R2-201ENST00000375371 2542 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 SMCR5-201ENST00000543475 2844 ntBASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 GYS1-202ENST00000323798 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 AC025279.1-201ENST00000604430 4818 ntTSL 5 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 NDRG4-204ENST00000394282 3626 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 CDKL2-201ENST00000307465 2565 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 TNFSF13B-201ENST00000375887 2582 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 ADAM32-203ENST00000437682 2281 ntTSL 2 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 AL121900.1-201ENST00000428285 1695 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 DPP9-201ENST00000262960 4295 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 ANO3-201ENST00000256737 6642 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 RAD50-201ENST00000378823 8306 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 ANKZF1-203ENST00000410034 2486 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 PKP1-201ENST00000263946 5447 ntTSL 5 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 SPATA33-201ENST00000301031 2190 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 TMEM86A-201ENST00000280734 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 CEP63-204ENST00000383229 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 ZSWIM5P2-201ENST00000420212 2038 ntBASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 FAM47DP-201ENST00000402340 3290 ntBASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 EPS8-212ENST00000543523 3925 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 IL16-203ENST00000394652 2397 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 PRICKLE1-209ENST00000552240 3311 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 SGO1-AS1-204ENST00000634618 2371 ntTSL 5 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 TATDN2P2-201ENST00000403590 2226 ntBASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 UBE2L3-201ENST00000342192 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 RPL36AL-201ENST00000298289 746 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 AKR1E2-202ENST00000334019 1036 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 SARNP-201ENST00000336133 926 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 SPTLC1-202ENST00000337841 946 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 CXorf40B-201ENST00000355203 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 ITLN2-201ENST00000368029 1151 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 SRSF10-205ENST00000374452 1194 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 LDHAL6FP-201ENST00000405916 1082 ntBASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 HNRNPA1P46-201ENST00000411735 937 ntBASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 FAM238A-201ENST00000412114 1091 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 AC245128.2-201ENST00000412970 284 ntBASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 ACTBP1-201ENST00000417985 1113 ntBASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 FAM238B-202ENST00000423917 1220 ntTSL 5 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 HOTAIRM1-202ENST00000428939 889 ntTSL 2 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 GPAA1P1-201ENST00000453019 931 ntBASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 AC009517.1-201ENST00000454750 570 ntBASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 CMTM1-206ENST00000457188 765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 ATP6V0CP1-201ENST00000482495 618 ntBASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 GPR79-201ENST00000498175 868 ntBASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 ARL15-205ENST00000507646 578 ntTSL 5 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 NDRG1-207ENST00000518066 560 ntTSL 5 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 AC124301.2-201ENST00000529781 556 ntTSL 2 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 CMTM1-215ENST00000531885 590 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 AC087222.1-201ENST00000571113 504 ntBASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 LINC00470-211ENST00000584492 1281 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 RN7SL217P-201ENST00000584520 286 ntBASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 HKR1-206ENST00000586897 510 ntTSL 4 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 AC015802.4-203ENST00000592622 570 ntTSL 4 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 AC010422.2-201ENST00000593554 635 ntTSL 3 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 AC245884.8-201ENST00000599382 880 ntBASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 AL669831.6-201ENST00000635557 837 ntBASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 AC010325.1-203ENST00000636757 380 ntAPPRIS P5 TSL 5 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 RHOXF1P3-202ENST00000639347 851 ntTSL 5 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 RPS3-217ENST00000531188 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 NCALD-202ENST00000311028 3655 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 SEMA6D-204ENST00000358066 5913 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 CASP7-210ENST00000614447 2555 ntTSL 5 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 BMP4-202ENST00000417573 1784 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 FYN-203ENST00000368667 2416 ntAPPRIS P4 TSL 5 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 PTPRR-209ENST00000549308 1603 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 COL11A1-202ENST00000358392 7327 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 BACH2-210ENST00000537989 9108 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 LIN54-206ENST00000506560 2757 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 EIF3I-202ENST00000373586 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 KNSTRN-203ENST00000448395 1464 ntTSL 2 BASIC10.79□□□□□ -0.68
NPIPA3F8WFD2 AC018645.3-201ENST00000628855 2646 ntBASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 327.6 ms